RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 S100A1P23297 94 aa11.2□□□□□ -0.62
FOXN3-204ENST00000553840 HNRNPA3P51991 378 aaKnown RBP11.2□□□□□ -0.62
FOXN3-204ENST00000553840 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
FOXN3-204ENST00000553840 NPYP01303 97 aa11.19□□□□□ -0.62
FOXN3-204ENST00000553840 RAB5AP20339 215 aa11.19□□□□□ -0.62
FOXN3-204ENST00000553840 Q6ZRU5 148 aa11.19□□□□□ -0.62
FOXN3-204ENST00000553840 Q6ZUT4 128 aa11.19□□□□□ -0.62
FOXN3-204ENST00000553840 SPANXA1Q9NS26 97 aa11.19□□□□□ -0.62
FOXN3-204ENST00000553840 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
FOXN3-204ENST00000553840 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
FOXN3-204ENST00000553840 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
FOXN3-204ENST00000553840 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
FOXN3-204ENST00000553840 TMEM136Q6ZRR5 245 aa11.18□□□□□ -0.62
FOXN3-204ENST00000553840 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
FOXN3-204ENST00000553840 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
FOXN3-204ENST00000553840 LOC107984640A0A0U1RRK4 108 aa11.16□□□□□ -0.62
FOXN3-204ENST00000553840 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
FOXN3-204ENST00000553840 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
FOXN3-204ENST00000553840 IFI27P40305 119 aaPredicted RBP11.15□□□□□ -0.62
FOXN3-204ENST00000553840 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
FOXN3-204ENST00000553840 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.62
FOXN3-204ENST00000553840 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
FOXN3-204ENST00000553840 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
FOXN3-204ENST00000553840 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
FOXN3-204ENST00000553840 SPAG11BQ08648 103 aa11.12□□□□□ -0.63
FOXN3-204ENST00000553840 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
FOXN3-204ENST00000553840 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
FOXN3-204ENST00000553840 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
FOXN3-204ENST00000553840 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
FOXN3-204ENST00000553840 F8WDY8 70 aa11.11□□□□□ -0.63
FOXN3-204ENST00000553840 KIAA1644Q3SXP7 199 aa11.11□□□□□ -0.63
FOXN3-204ENST00000553840 GNB1LQ9BYB4 327 aa11.11□□□□□ -0.63
FOXN3-204ENST00000553840 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
FOXN3-204ENST00000553840 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
FOXN3-204ENST00000553840 LOC389332A0A1B0GUA5 103 aa11.1□□□□□ -0.63
FOXN3-204ENST00000553840 PRR3P79522 188 aaKnown RBP11.1□□□□□ -0.63
FOXN3-204ENST00000553840 COX19Q49B96 90 aa11.1□□□□□ -0.63
FOXN3-204ENST00000553840 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
FOXN3-204ENST00000553840 IGHV3OR16-9A0A0B4J2B5 98 aa11.09□□□□□ -0.63
FOXN3-204ENST00000553840 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
FOXN3-204ENST00000553840 FAM104AQ969W3 186 aa11.09□□□□□ -0.63
FOXN3-204ENST00000553840 RPL18AQ02543 176 aaKnown RBP11.08□□□□□ -0.64
FOXN3-204ENST00000553840 Q8N8P6 123 aa11.08□□□□□ -0.64
FOXN3-204ENST00000553840 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
FOXN3-204ENST00000553840 NDUFA1O15239 70 aa11.07□□□□□ -0.64
FOXN3-204ENST00000553840 FABP9Q0Z7S8 132 aa11.07□□□□□ -0.64
FOXN3-204ENST00000553840 Q6ZRP5 223 aa11.07□□□□□ -0.64
FOXN3-204ENST00000553840 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
FOXN3-204ENST00000553840 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
FOXN3-204ENST00000553840 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 K7EMI3 77 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 MT-ND6P03923 174 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 Q6ZN92 141 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 C2orf88Q9BSF0 95 aa11.06□□□□□ -0.64
FOXN3-204ENST00000553840 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
FOXN3-204ENST00000553840 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
FOXN3-204ENST00000553840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
FOXN3-204ENST00000553840 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
FOXN3-204ENST00000553840 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
FOXN3-204ENST00000553840 TRAPPC1Q9Y5R8 145 aa11.05□□□□□ -0.64
FOXN3-204ENST00000553840 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
FOXN3-204ENST00000553840 G0S2P27469 103 aa11.04□□□□□ -0.64
FOXN3-204ENST00000553840 C2orf66Q6UXQ4 117 aa11.04□□□□□ -0.64
FOXN3-204ENST00000553840 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
FOXN3-204ENST00000553840 PLA2G2DQ9UNK4 145 aa11.04□□□□□ -0.64
FOXN3-204ENST00000553840 A0A087WZ39 114 aa11.03□□□□□ -0.64
FOXN3-204ENST00000553840 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
FOXN3-204ENST00000553840 LINC00242Q5T6M2 205 aa11.03□□□□□ -0.64
FOXN3-204ENST00000553840 SPINK6Q6UWN8 80 aa11.03□□□□□ -0.64
FOXN3-204ENST00000553840 NPSP0C0P6 89 aa11.02□□□□□ -0.65
FOXN3-204ENST00000553840 C9orf116Q5BN46 136 aaPredicted RBP11.02□□□□□ -0.65
FOXN3-204ENST00000553840 ALKBH7Q9BT30 221 aaPredicted RBP11.02□□□□□ -0.65
FOXN3-204ENST00000553840 VCX2Q9H322 139 aa11.02□□□□□ -0.65
FOXN3-204ENST00000553840 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
FOXN3-204ENST00000553840 MT1HL1P0DM35 61 aa11.01□□□□□ -0.65
FOXN3-204ENST00000553840 REG3GQ6UW15 175 aa11.01□□□□□ -0.65
FOXN3-204ENST00000553840 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
FOXN3-204ENST00000553840 UBE2D1P51668 147 aa11□□□□□ -0.65
FOXN3-204ENST00000553840 PAPPA-AS1Q5QFB9 102 aa11□□□□□ -0.65
FOXN3-204ENST00000553840 FAT3Q8TDW7 4589 aa11□□□□□ -0.65
FOXN3-204ENST00000553840 TLX1NBP0CAT3 122 aa10.99□□□□□ -0.65
FOXN3-204ENST00000553840 UNQ6190/PRO20217Q6UXQ8 127 aa10.99□□□□□ -0.65
FOXN3-204ENST00000553840 LINC01561Q8N1V8 128 aa10.99□□□□□ -0.65
FOXN3-204ENST00000553840 LINC01600Q96MT4 127 aa10.99□□□□□ -0.65
FOXN3-204ENST00000553840 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
FOXN3-204ENST00000553840 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
FOXN3-204ENST00000553840 AMELXQ99217 191 aa10.98□□□□□ -0.65
FOXN3-204ENST00000553840 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
FOXN3-204ENST00000553840 TRBV30A0A0K0K1B3 111 aa10.97□□□□□ -0.65
FOXN3-204ENST00000553840 SEC11AP67812 179 aa10.97□□□□□ -0.65
FOXN3-204ENST00000553840 KIAA0087Q14695 138 aa10.97□□□□□ -0.65
FOXN3-204ENST00000553840 IGIPA6NJ69 53 aa10.96□□□□□ -0.65
FOXN3-204ENST00000553840 PRSS2P07478 247 aa10.96□□□□□ -0.65
FOXN3-204ENST00000553840 SRSF9Q13242 221 aaKnown RBP eCLIP10.95□□□□□ -0.663e-8■■■■□ 26.7
FOXN3-204ENST00000553840 GAGE2EQ4V326 116 aa10.95□□□□□ -0.66
FOXN3-204ENST00000553840 ZC2HC1BQ5TFG8 222 aa10.95□□□□□ -0.66
FOXN3-204ENST00000553840 LINC00173Q6ZV60 143 aa10.95□□□□□ -0.66
FOXN3-204ENST00000553840 FA2HQ7L5A8 372 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms