RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 PHOX2AO14813 284 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 NCR2O95944 276 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 RAB4AP20338 218 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 FCER1GP30273 86 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-220ENST00000553491 NIT1Q86X76 327 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 Q8N976 141 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 RMI2Q96E14 147 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
ATXN3-220ENST00000553491 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-220ENST00000553491 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-220ENST00000553491 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-220ENST00000553491 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 I3L3M4 83 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 K7EP13 123 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 HLA-DQA1P01909 254 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 APCSP02743 223 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 Q0VG73 95 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
ATXN3-220ENST00000553491 MPV17L2Q567V2 206 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 LINC00269Q8N2A0 174 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
ATXN3-220ENST00000553491 A0A087WTM6 91 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 A0A1B0GW15 77 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 PPP1R17O96001 155 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 RBX1P62877 108 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 HBBP68871 147 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 FRZBQ92765 325 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-220ENST00000553491 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
ATXN3-220ENST00000553491 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 D6R8Y8 96 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 ESDP10768 282 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
ATXN3-220ENST00000553491 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
ATXN3-220ENST00000553491 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
ATXN3-220ENST00000553491 TCAPO15273 167 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 MT-ND6P03923 174 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 FGF6P10767 208 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 LAGE3Q14657 143 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 SS18Q15532 418 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 MIAQ16674 131 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 LINC01620Q4KN68 170 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 HIGD2BQ4VC39 106 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATXN3-220ENST00000553491 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-220ENST00000553491 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
ATXN3-220ENST00000553491 RYR3Q15413 4870 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms