RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TMEM191AQ9H0A3 160 aa6.16□□□□□ -1.42
ACTN1-208ENST00000553370 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
ACTN1-208ENST00000553370 RNF213Q63HN8 5207 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 VCYO14598 125 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 ESDP10768 282 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 SPAG11BQ08648 103 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 RIGQ13278 110 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 PET117Q6UWS5 81 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 AMN1Q8IY45 258 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 TSKUQ8WUA8 353 aa6.15□□□□□ -1.42
ACTN1-208ENST00000553370 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
ACTN1-208ENST00000553370 ZNF727A8MUV8 499 aa6.14□□□□□ -1.43
ACTN1-208ENST00000553370 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
ACTN1-208ENST00000553370 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
ACTN1-208ENST00000553370 C1orf137Q5JT78 98 aa6.14□□□□□ -1.43
ACTN1-208ENST00000553370 C5orf38Q86SI9 138 aa6.14□□□□□ -1.43
ACTN1-208ENST00000553370 RAB4AP20338 218 aa6.13□□□□□ -1.43
ACTN1-208ENST00000553370 POLR2KP53803 58 aaKnown RBP6.12□□□□□ -1.43
ACTN1-208ENST00000553370 C9orf116Q5BN46 136 aaPredicted RBP6.12□□□□□ -1.43
ACTN1-208ENST00000553370 Q6ZUT4 128 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 LINC01551Q86U37 167 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 NUP35Q8NFH5 326 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 ORAOV1Q8WV07 137 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
ACTN1-208ENST00000553370 SMDT1Q9H4I9 107 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 OSTCQ9NRP0 149 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 PSORS1C2Q9UIG4 136 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 UBE2D4Q9Y2X8 147 aa6.12□□□□□ -1.43
ACTN1-208ENST00000553370 NDUFA1O15239 70 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 TCAPO15273 167 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 UQCC3Q6UW78 93 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 PHF5AQ7RTV0 110 aaKnown RBP6.11□□□□□ -1.43
ACTN1-208ENST00000553370 OR10D4PQ8NGN7 298 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 DIRC1Q969H9 104 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 NAT8BQ9UHF3 227 aa6.11□□□□□ -1.43
ACTN1-208ENST00000553370 A0A087WZ39 114 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 IFITM10A6NMD0 228 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.1□□□□□ -1.43
ACTN1-208ENST00000553370 CKS2P33552 79 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
ACTN1-208ENST00000553370 ADIRFQ15847 76 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
ACTN1-208ENST00000553370 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 IMMP2LQ96T52 175 aa6.1□□□□□ -1.43
ACTN1-208ENST00000553370 CSDC2Q9Y534 153 aaKnown RBP6.1□□□□□ -1.43
ACTN1-208ENST00000553370 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
ACTN1-208ENST00000553370 VPREB1P12018 145 aa6.09□□□□□ -1.43
ACTN1-208ENST00000553370 UBE2BP63146 152 aa6.09□□□□□ -1.43
ACTN1-208ENST00000553370 HBBP68871 147 aa6.09□□□□□ -1.43
ACTN1-208ENST00000553370 PEA15Q15121 130 aa6.09□□□□□ -1.43
ACTN1-208ENST00000553370 COMMD7Q86VX2 200 aa6.09□□□□□ -1.43
ACTN1-208ENST00000553370 S100A8P05109 93 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 S100A1P23297 94 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 UBE2D1P51668 147 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 RPL39P62891 51 aaKnown RBP6.08□□□□□ -1.44
ACTN1-208ENST00000553370 MRPL51Q4U2R6 128 aaKnown RBP6.08□□□□□ -1.44
ACTN1-208ENST00000553370 GAGE2EQ4V326 116 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 NRACQ8N912 160 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 TIMM21Q9BVV7 248 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 SPANXA1Q9NS26 97 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 GAGE2DQ9UEU5 116 aa6.08□□□□□ -1.44
ACTN1-208ENST00000553370 A0A1B0GW15 77 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 F8W036 122 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 F8WDY8 70 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 TMEM241Q24JQ0 296 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 FAM74A3Q4VXF1 159 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 C20orf78Q9BR46 151 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 MRPL35Q9NZE8 188 aaKnown RBP6.07□□□□□ -1.44
ACTN1-208ENST00000553370 V9GYV3 84 aa6.07□□□□□ -1.44
ACTN1-208ENST00000553370 D6R8Y8 96 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 M0QXV9 152 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 IGLV7-43P04211 117 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 SRP19P09132 144 aaKnown RBP6.06□□□□□ -1.44
ACTN1-208ENST00000553370 RAB5AP20339 215 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 IFI27P40305 119 aaPredicted RBP6.06□□□□□ -1.44
ACTN1-208ENST00000553370 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 SMIM2Q9BVW6 85 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
ACTN1-208ENST00000553370 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
ACTN1-208ENST00000553370 TMEM218A2RU14 115 aa6.05□□□□□ -1.44
ACTN1-208ENST00000553370 H0Y9J4 135 aa6.05□□□□□ -1.44
ACTN1-208ENST00000553370 MRPL54Q6P161 138 aaKnown RBP6.05□□□□□ -1.44
ACTN1-208ENST00000553370 PACRGQ96M98 296 aaPredicted RBP6.05□□□□□ -1.44
ACTN1-208ENST00000553370 NAT8Q9UHE5 227 aa6.05□□□□□ -1.44
ACTN1-208ENST00000553370 ATP6V1G1O75348 118 aa6.04□□□□□ -1.44
ACTN1-208ENST00000553370 PRSS2P07478 247 aa6.04□□□□□ -1.44
ACTN1-208ENST00000553370 RPL23P62829 140 aaKnown RBP6.04□□□□□ -1.44
ACTN1-208ENST00000553370 C10orf91Q5T1B1 145 aa6.04□□□□□ -1.44
ACTN1-208ENST00000553370 UNQ6190/PRO20217Q6UXQ8 127 aa6.04□□□□□ -1.44
ACTN1-208ENST00000553370 C2orf88Q9BSF0 95 aa6.04□□□□□ -1.44
ACTN1-208ENST00000553370 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
ACTN1-208ENST00000553370 RPL32P62910 135 aaKnown RBP6.03□□□□□ -1.44
ACTN1-208ENST00000553370 MRPS36P82909 103 aaKnown RBP6.03□□□□□ -1.44
ACTN1-208ENST00000553370 PRR4Q16378 134 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms