RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
ACTN1-207ENST00000553290 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-207ENST00000553290 MAP1LC3AQ9H492 121 aa8.15□□□□□ -1.1
ACTN1-207ENST00000553290 PYGO1Q9Y3Y4 419 aa8.15□□□□□ -1.1
ACTN1-207ENST00000553290 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
ACTN1-207ENST00000553290 IFITM10A6NMD0 228 aa8.14□□□□□ -1.11
ACTN1-207ENST00000553290 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 LOC389332A0A1B0GUA5 103 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 F8WDY8 70 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 SPAG11BQ08648 103 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 UQCC3Q6UW78 93 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 Q8N8P6 123 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
ACTN1-207ENST00000553290 GAGE2BQ13066 116 aa8.12□□□□□ -1.11
ACTN1-207ENST00000553290 RNF151Q2KHN1 245 aa8.12□□□□□ -1.11
ACTN1-207ENST00000553290 SERTAD4-AS1Q5TG53 156 aa8.12□□□□□ -1.11
ACTN1-207ENST00000553290 ORAOV1Q8WV07 137 aa8.12□□□□□ -1.11
ACTN1-207ENST00000553290 TMEM141Q96I45 108 aa8.12□□□□□ -1.11
ACTN1-207ENST00000553290 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
ACTN1-207ENST00000553290 TGIF2-C20orf24A0A0A6YYL0 155 aa8.11□□□□□ -1.11
ACTN1-207ENST00000553290 K7EMI3 77 aa8.11□□□□□ -1.11
ACTN1-207ENST00000553290 CTDSP1Q9GZU7 261 aa8.11□□□□□ -1.11
ACTN1-207ENST00000553290 CYSLTR1Q9Y271 337 aa8.11□□□□□ -1.11
ACTN1-207ENST00000553290 TMEM218A2RU14 115 aa8.1□□□□□ -1.11
ACTN1-207ENST00000553290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-207ENST00000553290 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
ACTN1-207ENST00000553290 IFITM2Q01629 132 aa8.1□□□□□ -1.11
ACTN1-207ENST00000553290 ORMDL2Q53FV1 153 aa8.1□□□□□ -1.11
ACTN1-207ENST00000553290 TEX43Q6ZNM6 134 aa8.1□□□□□ -1.11
ACTN1-207ENST00000553290 NXT2Q9NPJ8 142 aaKnown RBP8.1□□□□□ -1.11
ACTN1-207ENST00000553290 TRAV9-1A0A075B6T8 112 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 A0A087WZ39 114 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 NDUFA1O15239 70 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 ADCYAP1P18509 176 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
ACTN1-207ENST00000553290 LINC00242Q5T6M2 205 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 C2orf66Q6UXQ4 117 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 Q6ZN92 141 aa8.09□□□□□ -1.11
ACTN1-207ENST00000553290 MRPL35Q9NZE8 188 aaKnown RBP8.09□□□□□ -1.11
ACTN1-207ENST00000553290 NPSP0C0P6 89 aa8.08□□□□□ -1.12
ACTN1-207ENST00000553290 G0S2P27469 103 aa8.08□□□□□ -1.12
ACTN1-207ENST00000553290 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
ACTN1-207ENST00000553290 SEC11CQ9BY50 192 aa8.08□□□□□ -1.12
ACTN1-207ENST00000553290 A0A0J9YXV3 536 aa8.07□□□□□ -1.12
ACTN1-207ENST00000553290 UBE2D1P51668 147 aa8.07□□□□□ -1.12
ACTN1-207ENST00000553290 Q6ZRP5 223 aa8.07□□□□□ -1.12
ACTN1-207ENST00000553290 VCX2Q9H322 139 aa8.07□□□□□ -1.12
ACTN1-207ENST00000553290 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
ACTN1-207ENST00000553290 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
ACTN1-207ENST00000553290 S100PP25815 95 aa8.06□□□□□ -1.12
ACTN1-207ENST00000553290 LINC01561Q8N1V8 128 aa8.06□□□□□ -1.12
ACTN1-207ENST00000553290 AMELXQ99217 191 aa8.06□□□□□ -1.12
ACTN1-207ENST00000553290 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-207ENST00000553290 PAPPA-AS1Q5QFB9 102 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 C10orf25Q5T742 122 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 LINC00173Q6ZV60 143 aa8.05□□□□□ -1.12
ACTN1-207ENST00000553290 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
ACTN1-207ENST00000553290 SPINK6Q6UWN8 80 aa8.04□□□□□ -1.12
ACTN1-207ENST00000553290 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
ACTN1-207ENST00000553290 GNB1LQ9BYB4 327 aa8.04□□□□□ -1.12
ACTN1-207ENST00000553290 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
ACTN1-207ENST00000553290 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 SEC11AP67812 179 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 COX19Q49B96 90 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 COMMD7Q86VX2 200 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 TIMM17AQ99595 171 aa8.03□□□□□ -1.12
ACTN1-207ENST00000553290 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
ACTN1-207ENST00000553290 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
ACTN1-207ENST00000553290 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-207ENST00000553290 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
ACTN1-207ENST00000553290 LINC01549A6NIU2 74 aa8.01□□□□□ -1.13
ACTN1-207ENST00000553290 HERVK_113P63121 156 aa8.01□□□□□ -1.13
ACTN1-207ENST00000553290 ERASQ7Z444 233 aa8.01□□□□□ -1.13
ACTN1-207ENST00000553290 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
ACTN1-207ENST00000553290 MT-ND6P03923 174 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 PRSS2P07478 247 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 RHEBQ15382 184 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 C10orf91Q5T1B1 145 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 C2orf82Q6UX34 121 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
ACTN1-207ENST00000553290 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 ALKBH7Q9BT30 221 aaPredicted RBP8□□□□□ -1.13
ACTN1-207ENST00000553290 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
ACTN1-207ENST00000553290 CARHSP1Q9Y2V2 147 aaKnown RBP8□□□□□ -1.13
ACTN1-207ENST00000553290 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 C6orf226Q5I0X4 101 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 Q8IZM0 81 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 GEMIN7Q9H840 131 aaKnown RBP7.99□□□□□ -1.13
ACTN1-207ENST00000553290 RPS10P5Q9NQ39 176 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
ACTN1-207ENST00000553290 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms