RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 SPINK6Q6UWN8 80 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 UBE2WQ96B02 151 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 RMI2Q96E14 147 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 TMEM243Q9BU79 118 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 UBE2L6O14933 153 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BKO60814 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BJP06899 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BOP23527 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 G0S2P27469 103 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BBP33778 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BDP58876 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BCP62807 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 SMAGPQ0VAQ4 97 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST2H2BEQ16778 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 RNASEKQ6P5S7 137 aaKnown RBP6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 NTM-AS1Q6ZSK4 140 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 NIT1Q86X76 327 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BHQ93079 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 TMEM18Q96B42 140 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BNQ99877 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 HIST1H2BMQ99879 126 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 PLAC8Q9NZF1 115 aa6.31□□□□□ -1.4
SLC48A1-209ENST00000552003 LINC01546A6NGU7 62 aa6.3□□□□□ -1.4
SLC48A1-209ENST00000552003 LINC00614P0C842 121 aa6.3□□□□□ -1.4
SLC48A1-209ENST00000552003 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
SLC48A1-209ENST00000552003 H7C423 109 aa6.29□□□□□ -1.4
SLC48A1-209ENST00000552003 SLPIP03973 132 aa6.29□□□□□ -1.4
SLC48A1-209ENST00000552003 ESDP10768 282 aa6.29□□□□□ -1.4
SLC48A1-209ENST00000552003 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
SLC48A1-209ENST00000552003 C20orf203Q8NBC4 194 aa6.29□□□□□ -1.4
SLC48A1-209ENST00000552003 CHCHD7Q9BUK0 85 aa6.29□□□□□ -1.4
SLC48A1-209ENST00000552003 A0A087WX48 190 aa6.28□□□□□ -1.4
SLC48A1-209ENST00000552003 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
SLC48A1-209ENST00000552003 CYSLTR1Q9Y271 337 aa6.28□□□□□ -1.4
SLC48A1-209ENST00000552003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 TMEM262E9PQX1 116 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 HSBP1O75506 76 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 SERF1AO75920 110 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 HBDP02042 147 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 ZNF25P17030 456 aaPredicted RBP6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 GAGE6Q13070 117 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 PRR4Q16378 134 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 AMMECR1LQ6DCA0 310 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 KRTAP26-1Q6PEX3 210 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 MRPL52Q86TS9 123 aaKnown RBP6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 C7orf33Q8WU49 177 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 TMEM101Q96IK0 257 aa6.27□□□□□ -1.41
SLC48A1-209ENST00000552003 A4D1N5 150 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 S100A6P06703 90 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 FGF6P10767 208 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 NDUFA6P56556 154 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 C2orf66Q6UXQ4 117 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 TIMM21Q9BVV7 248 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
SLC48A1-209ENST00000552003 A0A1B0GUV1 79 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 LINC00310P59036 64 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 RBX1P62877 108 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 RPL39P62891 51 aaKnown RBP6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 MPV17L2Q567V2 206 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 OR5A1Q8NGJ0 315 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 TOMM6Q96B49 74 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 UBE2D4Q9Y2X8 147 aa6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
SLC48A1-209ENST00000552003 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 NPSP0C0P6 89 aa6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 PMCHL1Q16048 86 aa6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 SCGB3A1Q96QR1 104 aa6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 TIMM17AQ99595 171 aa6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 PYGO1Q9Y3Y4 419 aa6.24□□□□□ -1.41
SLC48A1-209ENST00000552003 A0A096LNJ9 63 aa6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 ANGP03950 147 aaKnown RBP6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 MRPS36P82909 103 aaKnown RBP6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 Q6ZN92 141 aa6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 ERASQ7Z444 233 aa6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 TMEM141Q96I45 108 aa6.23□□□□□ -1.41
SLC48A1-209ENST00000552003 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 ATP5LO75964 103 aa6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 CRPP02741 224 aa6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 PDZD11Q5EBL8 140 aa6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 FAM19A2Q8N3H0 131 aa6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 ZNF664Q8N3J9 261 aa6.22□□□□□ -1.41
SLC48A1-209ENST00000552003 IGLV4-60A0A075B6I1 120 aa6.21□□□□□ -1.42
SLC48A1-209ENST00000552003 IGLV4-3A0A075B6K6 122 aa6.21□□□□□ -1.42
SLC48A1-209ENST00000552003 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.42
SLC48A1-209ENST00000552003 NUPR1O60356 82 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms