RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 RPP21Q9H633 154 aaKnown RBP6.19□□□□□ -1.42
VPS29-208ENST00000550267 ST20Q9HBF5 79 aa6.19□□□□□ -1.42
VPS29-208ENST00000550267 BIN3Q9NQY0 253 aa6.19□□□□□ -1.42
VPS29-208ENST00000550267 MRPL35Q9NZE8 188 aaKnown RBP6.19□□□□□ -1.42
VPS29-208ENST00000550267 C7orf77A4D0Y5 90 aa6.18□□□□□ -1.42
VPS29-208ENST00000550267 M0QXV9 152 aa6.18□□□□□ -1.42
VPS29-208ENST00000550267 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
VPS29-208ENST00000550267 C10orf25Q5T742 122 aa6.18□□□□□ -1.42
VPS29-208ENST00000550267 IMMP2LQ96T52 175 aa6.18□□□□□ -1.42
VPS29-208ENST00000550267 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
VPS29-208ENST00000550267 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
VPS29-208ENST00000550267 OR10D4PQ8NGN7 298 aa6.17□□□□□ -1.42
VPS29-208ENST00000550267 ORAOV1Q8WV07 137 aa6.17□□□□□ -1.42
VPS29-208ENST00000550267 MED9Q9NWA0 146 aa6.17□□□□□ -1.42
VPS29-208ENST00000550267 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
VPS29-208ENST00000550267 TRBV27A0A0K0K1C4 114 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 SMLR1H3BR10 107 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 TLX1NBP0CAT3 122 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 UNQ6190/PRO20217Q6UXQ8 127 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 Q6ZUT4 128 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 C6orf48Q9UBA6 75 aa6.16□□□□□ -1.42
VPS29-208ENST00000550267 A0A087X002 238 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 K7EN84 100 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 NDUFA1O15239 70 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 PDE6DO43924 150 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 ZNF861PO60384 105 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 SMDT1Q9H4I9 107 aa6.15□□□□□ -1.42
VPS29-208ENST00000550267 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
VPS29-208ENST00000550267 F8WDY8 70 aa6.14□□□□□ -1.43
VPS29-208ENST00000550267 FCER1GP30273 86 aa6.14□□□□□ -1.43
VPS29-208ENST00000550267 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
VPS29-208ENST00000550267 ZNF345Q14585 488 aa6.13□□□□□ -1.43
VPS29-208ENST00000550267 TMEM241Q24JQ0 296 aa6.13□□□□□ -1.43
VPS29-208ENST00000550267 OCC1Q8TAD7 63 aa6.13□□□□□ -1.43
VPS29-208ENST00000550267 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
VPS29-208ENST00000550267 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
VPS29-208ENST00000550267 KANTRA0A1W2PQU2 76 aa6.12□□□□□ -1.43
VPS29-208ENST00000550267 SMKR1H3BMG3 65 aa6.12□□□□□ -1.43
VPS29-208ENST00000550267 VCYO14598 125 aa6.12□□□□□ -1.43
VPS29-208ENST00000550267 GATCO43716 136 aaKnown RBP6.12□□□□□ -1.43
VPS29-208ENST00000550267 SMAGPQ0VAQ4 97 aa6.12□□□□□ -1.43
VPS29-208ENST00000550267 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
VPS29-208ENST00000550267 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
VPS29-208ENST00000550267 B5MCH6 92 aa6.11□□□□□ -1.43
VPS29-208ENST00000550267 RAB4AP20338 218 aa6.11□□□□□ -1.43
VPS29-208ENST00000550267 A8MWL6 223 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 TEX46H3BTG2 121 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 CRYGAP11844 174 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 AMN1Q8IY45 258 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 TIMM21Q9BVV7 248 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 CTDSP1Q9GZU7 261 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 TMEM191AQ9H0A3 160 aa6.1□□□□□ -1.43
VPS29-208ENST00000550267 NUPR1O60356 82 aa6.09□□□□□ -1.43
VPS29-208ENST00000550267 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
VPS29-208ENST00000550267 FAM104AQ969W3 186 aa6.09□□□□□ -1.43
VPS29-208ENST00000550267 BORCS7Q96B45 105 aa6.09□□□□□ -1.43
VPS29-208ENST00000550267 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
VPS29-208ENST00000550267 HMSDA8MTL9 139 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 NDUFC2-KCTD14E9PQ53 114 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
VPS29-208ENST00000550267 RPL39P62891 51 aaKnown RBP6.08□□□□□ -1.44
VPS29-208ENST00000550267 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 C2orf82Q6UX34 121 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 NRACQ8N912 160 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 TMEM18Q96B42 140 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 KIR2DL4Q99706 377 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 C22orf24Q9Y442 160 aa6.08□□□□□ -1.44
VPS29-208ENST00000550267 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
VPS29-208ENST00000550267 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
VPS29-208ENST00000550267 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
VPS29-208ENST00000550267 A0A1B0GUT8 65 aa6.07□□□□□ -1.44
VPS29-208ENST00000550267 FAM231DQ6ZW35 169 aa6.07□□□□□ -1.44
VPS29-208ENST00000550267 IFITM10A6NMD0 228 aa6.06□□□□□ -1.44
VPS29-208ENST00000550267 RPL28P46779 137 aaKnown RBP6.06□□□□□ -1.44
VPS29-208ENST00000550267 LINC00173Q6ZV60 143 aa6.06□□□□□ -1.44
VPS29-208ENST00000550267 LINC00469Q8N7U9 141 aa6.06□□□□□ -1.44
VPS29-208ENST00000550267 PACRGQ96M98 296 aaPredicted RBP6.06□□□□□ -1.44
VPS29-208ENST00000550267 TGIF2-C20orf24A0A0A6YYL0 155 aa6.05□□□□□ -1.44
VPS29-208ENST00000550267 HIGD1CA8MV81 97 aa6.05□□□□□ -1.44
VPS29-208ENST00000550267 BCE1O60756 84 aa6.05□□□□□ -1.44
VPS29-208ENST00000550267 LINC01547P58512 204 aaPredicted RBP6.05□□□□□ -1.44
VPS29-208ENST00000550267 HBBP68871 147 aa6.05□□□□□ -1.44
VPS29-208ENST00000550267 LINC00242Q5T6M2 205 aa6.05□□□□□ -1.44
VPS29-208ENST00000550267 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
VPS29-208ENST00000550267 PPP1R2P9O14990 202 aa6.04□□□□□ -1.44
VPS29-208ENST00000550267 PPP1R17O96001 155 aa6.04□□□□□ -1.44
VPS29-208ENST00000550267 MRPS36P82909 103 aaKnown RBP6.04□□□□□ -1.44
VPS29-208ENST00000550267 LBHQ53QV2 105 aaPredicted RBP6.04□□□□□ -1.44
VPS29-208ENST00000550267 SPANXA1Q9NS26 97 aa6.04□□□□□ -1.44
VPS29-208ENST00000550267 ZNF727A8MUV8 499 aa6.03□□□□□ -1.44
VPS29-208ENST00000550267 TAGLN2P37802 199 aaKnown RBP6.03□□□□□ -1.44
VPS29-208ENST00000550267 XAGE1AQ9HD64 81 aa6.03□□□□□ -1.44
VPS29-208ENST00000550267 RIGQ13278 110 aa6.02□□□□□ -1.45
VPS29-208ENST00000550267 MRPL51Q4U2R6 128 aaKnown RBP6.02□□□□□ -1.45
VPS29-208ENST00000550267 MRPL55Q7Z7F7 128 aaKnown RBP6.02□□□□□ -1.45
VPS29-208ENST00000550267 PPDPFQ9H3Y8 114 aa6.02□□□□□ -1.45
VPS29-208ENST00000550267 CEBPGP53567 150 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms