RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 GNG13Q9P2W3 67 aa5.57□□□□□ -1.52
CHD4-212ENST00000545083 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 ZNF727A8MUV8 499 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 H7C423 109 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 APCSP02743 223 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 RPL13AP40429 203 aaKnown RBP5.56□□□□□ -1.52
CHD4-212ENST00000545083 CEBPGP53567 150 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 NDUFA6P56556 154 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 CCL20P78556 96 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 TMEM241Q24JQ0 296 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 CD164L2Q6UWJ8 174 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 GATD1Q8NB37 220 aa5.56□□□□□ -1.52
CHD4-212ENST00000545083 RPL39LQ96EH5 51 aaKnown RBP5.56□□□□□ -1.52
CHD4-212ENST00000545083 A0A1B0GV50 99 aa5.55□□□□□ -1.52
CHD4-212ENST00000545083 PDE6DO43924 150 aa5.55□□□□□ -1.52
CHD4-212ENST00000545083 OR2D3Q8NGH3 330 aa5.55□□□□□ -1.52
CHD4-212ENST00000545083 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
CHD4-212ENST00000545083 SMIM7Q9BQ49 75 aa5.55□□□□□ -1.52
CHD4-212ENST00000545083 TSTD3H0UI37 97 aa5.54□□□□□ -1.52
CHD4-212ENST00000545083 NCR2O95944 276 aa5.54□□□□□ -1.52
CHD4-212ENST00000545083 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
CHD4-212ENST00000545083 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
CHD4-212ENST00000545083 LBHQ53QV2 105 aaPredicted RBP5.54□□□□□ -1.52
CHD4-212ENST00000545083 LYZL1Q6UWQ5 148 aa5.54□□□□□ -1.52
CHD4-212ENST00000545083 KRTAP7-1Q8IUC3 87 aa5.54□□□□□ -1.52
CHD4-212ENST00000545083 IMMP2LQ96T52 175 aa5.54□□□□□ -1.52
CHD4-212ENST00000545083 C19orf71A6NCJ1 209 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 SS18Q15532 418 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST3H2BBQ8N257 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 C2orf48Q96LS8 159 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 CDC42SE2Q9NRR3 84 aa5.53□□□□□ -1.52
CHD4-212ENST00000545083 TRAV9-1A0A075B6T8 112 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 SDHAF1A6NFY7 115 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 B5MCH6 92 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 F2Z2F3 143 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 TRGC2P03986 189 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 ESDP10768 282 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 RPS20P60866 119 aaKnown RBP5.52□□□□□ -1.53
CHD4-212ENST00000545083 ADIRFQ15847 76 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
CHD4-212ENST00000545083 FAM19A5Q7Z5A7 132 aaPredicted RBP5.52□□□□□ -1.53
CHD4-212ENST00000545083 TMEM101Q96IK0 257 aa5.52□□□□□ -1.53
CHD4-212ENST00000545083 RPP21Q9H633 154 aaKnown RBP5.52□□□□□ -1.53
CHD4-212ENST00000545083 TGIF2-C20orf24A0A0A6YYL0 155 aa5.51□□□□□ -1.53
CHD4-212ENST00000545083 LINC00587B1AMM8 73 aa5.51□□□□□ -1.53
CHD4-212ENST00000545083 COX7A2LO14548 114 aa5.51□□□□□ -1.53
CHD4-212ENST00000545083 FOXA3P55318 350 aaPredicted RBP5.51□□□□□ -1.53
CHD4-212ENST00000545083 TMEM18Q96B42 140 aa5.51□□□□□ -1.53
CHD4-212ENST00000545083 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
CHD4-212ENST00000545083 A0A087X002 238 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 TSHBP01222 138 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 CTRLP40313 264 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 RPL23P62829 140 aaKnown RBP5.5□□□□□ -1.53
CHD4-212ENST00000545083 TWIST1Q15672 202 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 RNF151Q2KHN1 245 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 COX19Q49B96 90 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 CENPWQ5EE01 88 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 C5orf38Q86SI9 138 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 MRPL52Q86TS9 123 aaKnown RBP5.5□□□□□ -1.53
CHD4-212ENST00000545083 OR10D4PQ8NGN7 298 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 TSKUQ8WUA8 353 aa5.5□□□□□ -1.53
CHD4-212ENST00000545083 I3L3M4 83 aa5.49□□□□□ -1.53
CHD4-212ENST00000545083 PMCHP20382 165 aa5.49□□□□□ -1.53
CHD4-212ENST00000545083 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
CHD4-212ENST00000545083 JOSD1Q15040 202 aaPredicted RBP5.49□□□□□ -1.53
CHD4-212ENST00000545083 RNASE13Q5GAN3 156 aaKnown RBP5.49□□□□□ -1.53
CHD4-212ENST00000545083 PYY3Q5JQD4 70 aa5.49□□□□□ -1.53
CHD4-212ENST00000545083 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
CHD4-212ENST00000545083 PACRGQ96M98 296 aaPredicted RBP5.49□□□□□ -1.53
CHD4-212ENST00000545083 CNFNQ9BYD5 112 aa5.49□□□□□ -1.53
CHD4-212ENST00000545083 XKRY2A2RUG3 117 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 M0QXV9 152 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 FABP4P15090 132 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 UBE2BP63146 152 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 C11orf52Q96A22 123 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 MRAP2Q96G30 205 aa5.48□□□□□ -1.53
CHD4-212ENST00000545083 RNASE7Q9H1E1 156 aaKnown RBP5.48□□□□□ -1.53
CHD4-212ENST00000545083 MRPL35Q9NZE8 188 aaKnown RBP5.48□□□□□ -1.53
CHD4-212ENST00000545083 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 IFITM10A6NMD0 228 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 ZNF861PO60384 105 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 TLX1NBP0CAT3 122 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 GAGE2EQ4V326 116 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 OCC1Q8TAD7 63 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 HIST1H2BLQ99880 126 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
CHD4-212ENST00000545083 GAGE2DQ9UEU5 116 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms