RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 FAM104AQ969W3 186 aa11□□□□□ -0.65
LTBR-210ENST00000542830 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
LTBR-210ENST00000542830 LOC107984640A0A0U1RRK4 108 aa10.99□□□□□ -0.65
LTBR-210ENST00000542830 IFITM10A6NMD0 228 aa10.99□□□□□ -0.65
LTBR-210ENST00000542830 Q6ZRU5 148 aa10.99□□□□□ -0.65
LTBR-210ENST00000542830 OR10D4PQ8NGN7 298 aa10.99□□□□□ -0.65
LTBR-210ENST00000542830 IMMP2LQ96T52 175 aa10.99□□□□□ -0.65
LTBR-210ENST00000542830 OPRPNQ99935 248 aaPredicted RBP10.99□□□□□ -0.65
LTBR-210ENST00000542830 IGHV3OR16-9A0A0B4J2B5 98 aa10.98□□□□□ -0.65
LTBR-210ENST00000542830 SPAG11BQ08648 103 aa10.98□□□□□ -0.65
LTBR-210ENST00000542830 LOC389332A0A1B0GUA5 103 aa10.97□□□□□ -0.65
LTBR-210ENST00000542830 F8WDY8 70 aa10.97□□□□□ -0.65
LTBR-210ENST00000542830 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
LTBR-210ENST00000542830 Q8N8P6 123 aa10.97□□□□□ -0.65
LTBR-210ENST00000542830 K7EMI3 77 aa10.96□□□□□ -0.65
LTBR-210ENST00000542830 CTDSP1Q9GZU7 261 aa10.96□□□□□ -0.65
LTBR-210ENST00000542830 IGLV4-3A0A075B6K6 122 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 TGIF2-C20orf24A0A0A6YYL0 155 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 TMEM218A2RU14 115 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 GAGE2BQ13066 116 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 RNF151Q2KHN1 245 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 ORAOV1Q8WV07 137 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 TMEM141Q96I45 108 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 CYSLTR1Q9Y271 337 aa10.95□□□□□ -0.66
LTBR-210ENST00000542830 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
LTBR-210ENST00000542830 SERTAD4-AS1Q5TG53 156 aa10.94□□□□□ -0.66
LTBR-210ENST00000542830 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
LTBR-210ENST00000542830 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
LTBR-210ENST00000542830 IFITM2Q01629 132 aa10.93□□□□□ -0.66
LTBR-210ENST00000542830 Q6ZN92 141 aa10.93□□□□□ -0.66
LTBR-210ENST00000542830 TEX43Q6ZNM6 134 aa10.93□□□□□ -0.66
LTBR-210ENST00000542830 C2orf88Q9BSF0 95 aa10.93□□□□□ -0.66
LTBR-210ENST00000542830 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
LTBR-210ENST00000542830 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
LTBR-210ENST00000542830 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.92□□□□□ -0.66
LTBR-210ENST00000542830 NDUFA1O15239 70 aa10.92□□□□□ -0.66
LTBR-210ENST00000542830 NPSP0C0P6 89 aa10.92□□□□□ -0.66
LTBR-210ENST00000542830 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
LTBR-210ENST00000542830 A0A087WZ39 114 aa10.91□□□□□ -0.66
LTBR-210ENST00000542830 G0S2P27469 103 aa10.91□□□□□ -0.66
LTBR-210ENST00000542830 RPL18AQ02543 176 aaKnown RBP10.91□□□□□ -0.66
LTBR-210ENST00000542830 LINC00242Q5T6M2 205 aa10.91□□□□□ -0.66
LTBR-210ENST00000542830 SEC11CQ9BY50 192 aa10.91□□□□□ -0.66
LTBR-210ENST00000542830 S100PP25815 95 aa10.89□□□□□ -0.67
LTBR-210ENST00000542830 UBE2D1P51668 147 aa10.89□□□□□ -0.67
LTBR-210ENST00000542830 Q6ZRP5 223 aa10.89□□□□□ -0.67
LTBR-210ENST00000542830 LINC01561Q8N1V8 128 aa10.89□□□□□ -0.67
LTBR-210ENST00000542830 VCX2Q9H322 139 aa10.89□□□□□ -0.67
LTBR-210ENST00000542830 PAPPA-AS1Q5QFB9 102 aa10.88□□□□□ -0.67
LTBR-210ENST00000542830 AMELXQ99217 191 aa10.88□□□□□ -0.67
LTBR-210ENST00000542830 A0A0J9YXV3 536 aa10.87□□□□□ -0.67
LTBR-210ENST00000542830 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
LTBR-210ENST00000542830 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
LTBR-210ENST00000542830 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
LTBR-210ENST00000542830 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
LTBR-210ENST00000542830 COMMD7Q86VX2 200 aa10.86□□□□□ -0.67
LTBR-210ENST00000542830 KIAA0087Q14695 138 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 COX19Q49B96 90 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 SPINK6Q6UWN8 80 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 LINC00173Q6ZV60 143 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 TIMM17AQ99595 171 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 GNB1LQ9BYB4 327 aa10.85□□□□□ -0.67
LTBR-210ENST00000542830 MT1HL1P0DM35 61 aa10.84□□□□□ -0.67
LTBR-210ENST00000542830 SEC11AP67812 179 aa10.84□□□□□ -0.67
LTBR-210ENST00000542830 C10orf25Q5T742 122 aa10.84□□□□□ -0.67
LTBR-210ENST00000542830 C6orf48Q9UBA6 75 aa10.84□□□□□ -0.67
LTBR-210ENST00000542830 TRBV30A0A0K0K1B3 111 aa10.83□□□□□ -0.68
LTBR-210ENST00000542830 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
LTBR-210ENST00000542830 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
LTBR-210ENST00000542830 TOMM6Q96B49 74 aa10.83□□□□□ -0.68
LTBR-210ENST00000542830 LINC01549A6NIU2 74 aa10.82□□□□□ -0.68
LTBR-210ENST00000542830 HERVK_113P63121 156 aa10.82□□□□□ -0.68
LTBR-210ENST00000542830 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
LTBR-210ENST00000542830 MT-ND6P03923 174 aa10.81□□□□□ -0.68
LTBR-210ENST00000542830 PRSS2P07478 247 aa10.81□□□□□ -0.68
LTBR-210ENST00000542830 RHEBQ15382 184 aa10.81□□□□□ -0.68
LTBR-210ENST00000542830 C10orf91Q5T1B1 145 aa10.81□□□□□ -0.68
LTBR-210ENST00000542830 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
LTBR-210ENST00000542830 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.68
LTBR-210ENST00000542830 ERASQ7Z444 233 aa10.8□□□□□ -0.68
LTBR-210ENST00000542830 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
LTBR-210ENST00000542830 CARHSP1Q9Y2V2 147 aaKnown RBP10.8□□□□□ -0.68
LTBR-210ENST00000542830 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
LTBR-210ENST00000542830 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
LTBR-210ENST00000542830 SCGB3A1Q96QR1 104 aa10.79□□□□□ -0.68
LTBR-210ENST00000542830 ALKBH7Q9BT30 221 aaPredicted RBP10.79□□□□□ -0.68
LTBR-210ENST00000542830 GEMIN7Q9H840 131 aaKnown RBP10.79□□□□□ -0.68
LTBR-210ENST00000542830 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
LTBR-210ENST00000542830 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
LTBR-210ENST00000542830 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
LTBR-210ENST00000542830 LINC01546A6NGU7 62 aa10.78□□□□□ -0.68
LTBR-210ENST00000542830 NDUFC2-KCTD14E9PQ53 114 aa10.78□□□□□ -0.68
LTBR-210ENST00000542830 CKS1BP61024 79 aa10.78□□□□□ -0.68
LTBR-210ENST00000542830 C2orf82Q6UX34 121 aa10.78□□□□□ -0.68
LTBR-210ENST00000542830 Q8IZM0 81 aa10.78□□□□□ -0.68
LTBR-210ENST00000542830 TOMM7Q9P0U1 55 aa10.78□□□□□ -0.68
LTBR-210ENST00000542830 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms