RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 HBBP68871 147 aa8.2□□□□□ -1.1
RTN3-207ENST00000536011 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
RTN3-207ENST00000536011 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
RTN3-207ENST00000536011 Q6ZUT4 128 aa8.2□□□□□ -1.1
RTN3-207ENST00000536011 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
RTN3-207ENST00000536011 TNXBP22105 4242 aa8.2□□□□□ -1.1
RTN3-207ENST00000536011 PPBPP02775 128 aa8.19□□□□□ -1.1
RTN3-207ENST00000536011 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
RTN3-207ENST00000536011 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
RTN3-207ENST00000536011 LINC01600Q96MT4 127 aa8.19□□□□□ -1.1
RTN3-207ENST00000536011 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
RTN3-207ENST00000536011 F8WDY8 70 aa8.18□□□□□ -1.1
RTN3-207ENST00000536011 TNFRSF6BO95407 300 aa8.18□□□□□ -1.1
RTN3-207ENST00000536011 SPAG11BQ08648 103 aa8.18□□□□□ -1.1
RTN3-207ENST00000536011 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
RTN3-207ENST00000536011 C9JQL5 133 aa8.17□□□□□ -1.1
RTN3-207ENST00000536011 D6R8Y8 96 aa8.17□□□□□ -1.1
RTN3-207ENST00000536011 RPL18AQ02543 176 aaKnown RBP8.17□□□□□ -1.1
RTN3-207ENST00000536011 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
RTN3-207ENST00000536011 MRPL54Q6P161 138 aaKnown RBP8.17□□□□□ -1.1
RTN3-207ENST00000536011 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
RTN3-207ENST00000536011 RPL39P62891 51 aaKnown RBP8.16□□□□□ -1.1
RTN3-207ENST00000536011 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
RTN3-207ENST00000536011 ATP5L2Q7Z4Y8 100 aa8.16□□□□□ -1.1
RTN3-207ENST00000536011 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
RTN3-207ENST00000536011 A0A1B0GXF2 115 aa8.15□□□□□ -1.1
RTN3-207ENST00000536011 RAB5AP20339 215 aa8.15□□□□□ -1.1
RTN3-207ENST00000536011 ORMDL3Q8N138 153 aa8.15□□□□□ -1.1
RTN3-207ENST00000536011 ORAOV1Q8WV07 137 aa8.15□□□□□ -1.1
RTN3-207ENST00000536011 IMMP2LQ96T52 175 aa8.15□□□□□ -1.1
RTN3-207ENST00000536011 TGIF2-C20orf24A0A0A6YYL0 155 aa8.14□□□□□ -1.11
RTN3-207ENST00000536011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
RTN3-207ENST00000536011 NDUFA1O15239 70 aa8.14□□□□□ -1.11
RTN3-207ENST00000536011 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
RTN3-207ENST00000536011 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
RTN3-207ENST00000536011 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
RTN3-207ENST00000536011 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
RTN3-207ENST00000536011 NPYP01303 97 aa8.13□□□□□ -1.11
RTN3-207ENST00000536011 MT-ND6P03923 174 aa8.13□□□□□ -1.11
RTN3-207ENST00000536011 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
RTN3-207ENST00000536011 A0A1B0GVG6 124 aa8.12□□□□□ -1.11
RTN3-207ENST00000536011 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
RTN3-207ENST00000536011 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
RTN3-207ENST00000536011 TMEM136Q6ZRR5 245 aa8.12□□□□□ -1.11
RTN3-207ENST00000536011 PRELID3AQ96N28 172 aa8.12□□□□□ -1.11
RTN3-207ENST00000536011 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
RTN3-207ENST00000536011 OPRPNQ99935 248 aaPredicted RBP8.11□□□□□ -1.11
RTN3-207ENST00000536011 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
RTN3-207ENST00000536011 PNRC1Q12796 327 aaPredicted RBP8.1□□□□□ -1.11
RTN3-207ENST00000536011 ANAPC16Q96DE5 110 aa8.1□□□□□ -1.11
RTN3-207ENST00000536011 MAP1LC3AQ9H492 121 aa8.1□□□□□ -1.11
RTN3-207ENST00000536011 PSORS1C2Q9UIG4 136 aa8.1□□□□□ -1.11
RTN3-207ENST00000536011 A0A087WZ39 114 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 TLX1NBP0CAT3 122 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 Q6ZN92 141 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 FAM104AQ969W3 186 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 TMEM141Q96I45 108 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 LRP2P98164 4655 aa8.09□□□□□ -1.11
RTN3-207ENST00000536011 MT-ND4LP03901 98 aa8.08□□□□□ -1.12
RTN3-207ENST00000536011 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
RTN3-207ENST00000536011 C1orf137Q5JT78 98 aa8.08□□□□□ -1.12
RTN3-207ENST00000536011 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
RTN3-207ENST00000536011 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
RTN3-207ENST00000536011 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
RTN3-207ENST00000536011 K7EMI3 77 aa8.07□□□□□ -1.12
RTN3-207ENST00000536011 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
RTN3-207ENST00000536011 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
RTN3-207ENST00000536011 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
RTN3-207ENST00000536011 LOC389332A0A1B0GUA5 103 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 NPSP0C0P6 89 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 RAB14P61106 215 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 ORMDL2Q53FV1 153 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 UNQ6190/PRO20217Q6UXQ8 127 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 LINC01561Q8N1V8 128 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
RTN3-207ENST00000536011 C6orf48Q9UBA6 75 aa8.06□□□□□ -1.12
RTN3-207ENST00000536011 G0S2P27469 103 aa8.05□□□□□ -1.12
RTN3-207ENST00000536011 PAPPA-AS1Q5QFB9 102 aa8.05□□□□□ -1.12
RTN3-207ENST00000536011 C10orf25Q5T742 122 aa8.05□□□□□ -1.12
RTN3-207ENST00000536011 Q8N8P6 123 aa8.05□□□□□ -1.12
RTN3-207ENST00000536011 NDUFC2-KCTD14E9PQ53 114 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 PRSS2P07478 247 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 UBE2D1P51668 147 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 C2orf66Q6UXQ4 117 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 FAM19A5Q7Z5A7 132 aaPredicted RBP8.04□□□□□ -1.12
RTN3-207ENST00000536011 VCX2Q9H322 139 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
RTN3-207ENST00000536011 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
RTN3-207ENST00000536011 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
RTN3-207ENST00000536011 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
RTN3-207ENST00000536011 NXT2Q9NPJ8 142 aaKnown RBP8.03□□□□□ -1.12
RTN3-207ENST00000536011 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
RTN3-207ENST00000536011 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
RTN3-207ENST00000536011 M0QXV9 152 aa8.02□□□□□ -1.13
RTN3-207ENST00000536011 CKS1BP61024 79 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms