RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 LOC105371267A0A1B0GV96 52 aa5.73□□□□□ -1.49
PACS1-214ENST00000533811 K7EMI3 77 aa5.73□□□□□ -1.49
PACS1-214ENST00000533811 C18orf32Q8TCD1 76 aa5.73□□□□□ -1.49
PACS1-214ENST00000533811 A0A1B0GUV1 79 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 LINC01549A6NIU2 74 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 PRSS47A8MTI9 375 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 TCAPO15273 167 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 CKS2P33552 79 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 SRSF9Q13242 221 aaKnown RBP eCLIP5.72□□□□□ -1.49
PACS1-214ENST00000533811 AMN1Q8IY45 258 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 HIST3H2BBQ8N257 126 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 PRELID3AQ96N28 172 aa5.72□□□□□ -1.49
PACS1-214ENST00000533811 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
PACS1-214ENST00000533811 D6R8Y8 96 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 M0QY20 66 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 G0S2P27469 103 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 RPL32P62910 135 aaKnown RBP5.71□□□□□ -1.5
PACS1-214ENST00000533811 MRPL51Q4U2R6 128 aaKnown RBP5.71□□□□□ -1.5
PACS1-214ENST00000533811 SUMO4Q6EEV6 95 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 C20orf78Q9BR46 151 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 NIT2Q9NQR4 276 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 LINC00474Q9P2X8 69 aa5.71□□□□□ -1.5
PACS1-214ENST00000533811 TRAV26-2A0A0B4J265 109 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 HSBP1O75506 76 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 SERF1AO75920 110 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 SMIM6P0DI80 62 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 AMTP48728 403 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 AKR1D1P51857 326 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 KIAA1644Q3SXP7 199 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 FA2HQ7L5A8 372 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 CHCHD10Q8WYQ3 142 aaPredicted RBP5.7□□□□□ -1.5
PACS1-214ENST00000533811 LINC00526Q96FQ7 95 aa5.7□□□□□ -1.5
PACS1-214ENST00000533811 GVQW2A0A096LPI5 108 aaPredicted RBP5.69□□□□□ -1.5
PACS1-214ENST00000533811 TRBV6-5A0A0K0K1A5 114 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 LINC00614P0C842 121 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 COTL1Q14019 142 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 AMMECR1LQ6DCA0 310 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 HIST1H2BLQ99880 126 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 PKIGQ9Y2B9 76 aa5.69□□□□□ -1.5
PACS1-214ENST00000533811 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
PACS1-214ENST00000533811 TNFRSF6BO95407 300 aa5.68□□□□□ -1.5
PACS1-214ENST00000533811 GAGE2BQ13066 116 aa5.68□□□□□ -1.5
PACS1-214ENST00000533811 RNASEKQ6P5S7 137 aaKnown RBP5.68□□□□□ -1.5
PACS1-214ENST00000533811 ZNF664Q8N3J9 261 aa5.68□□□□□ -1.5
PACS1-214ENST00000533811 PRR26Q8N8Z3 221 aa5.68□□□□□ -1.5
PACS1-214ENST00000533811 ST20Q9HBF5 79 aa5.68□□□□□ -1.5
PACS1-214ENST00000533811 NPYP01303 97 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 FABP4P15090 132 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 SUMO2P61956 95 aaKnown RBP5.67□□□□□ -1.5
PACS1-214ENST00000533811 PRR4Q16378 134 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 Q8N8P6 123 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 SMIM2Q9BVW6 85 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 HSPB8Q9UJY1 196 aa5.67□□□□□ -1.5
PACS1-214ENST00000533811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
PACS1-214ENST00000533811 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
PACS1-214ENST00000533811 SMKR1H3BMG3 65 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 VCYO14598 125 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 XCL1P47992 114 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 LINC00310P59036 64 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 ORMDL2Q53FV1 153 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 NRACQ8N912 160 aa5.66□□□□□ -1.5
PACS1-214ENST00000533811 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
PACS1-214ENST00000533811 SDHAF1A6NFY7 115 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 I3L3M4 83 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 ZNF561-AS1K7EIQ3 104 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 NCR2O95944 276 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 HBDP02042 147 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 PTTG1IPP53801 180 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.5
PACS1-214ENST00000533811 SYCNQ0VAF6 134 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 FOXI1Q12951 378 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 OR10D4PQ8NGN7 298 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 KIR2DL4Q99706 377 aa5.65□□□□□ -1.5
PACS1-214ENST00000533811 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 TRBV27A0A0K0K1C4 114 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 C20orf202A1L168 122 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 IFITM10A6NMD0 228 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 FCER1GP30273 86 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 IFI27P40305 119 aaPredicted RBP5.64□□□□□ -1.51
PACS1-214ENST00000533811 JOSD1Q15040 202 aaPredicted RBP5.64□□□□□ -1.51
PACS1-214ENST00000533811 PDZD11Q5EBL8 140 aa5.64□□□□□ -1.51
PACS1-214ENST00000533811 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 CCL25O15444 150 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 ATP5LO75964 103 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 LEPROTL1O95214 131 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 DIRC1Q969H9 104 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 URB1-AS1Q96HZ7 61 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 MUC2Q02817 5179 aa5.63□□□□□ -1.51
PACS1-214ENST00000533811 LOC389332A0A1B0GUA5 103 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 NUPR1O60356 82 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 NPSP0C0P6 89 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 FGF6P10767 208 aa5.62□□□□□ -1.51
PACS1-214ENST00000533811 SMCPP49901 116 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms