RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 SNRPD3P62318 126 aaKnown RBP5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 TEX22C9J3V5 150 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 RETNQ9HD89 108 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 TET2Q6N021 2002 aaPredicted RBP5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 SIRPDQ9H106 197 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 LINC01546A6NGU7 62 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 UPK3BQ9BT76 320 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 A0A0J9YX75 114 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 JMJD7-PLA2G4BH0Y9G9 81 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 LECT2O14960 151 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 C20orf203Q8NBC4 194 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 C9orf85Q96MD7 179 aa5.07□□□□□ -1.6
TGFBR3-209ENST00000532540 NDUFC1O43677 76 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 MINOS1Q5TGZ0 78 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 MINOS1-NBL1R4GNA1 71 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 CUBNO60494 3623 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 BUB3O43684 328 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 MED14OSP0DP75 135 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 ENHOQ6UWT2 76 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 IGLV4-69A0A075B6H9 119 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 IGHV3OR16-12A0A075B7B8 117 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 ELANEP08246 267 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 FAM19A4Q96LR4 140 aa5.06□□□□□ -1.6
TGFBR3-209ENST00000532540 DNAJC9-AS1A6NH13 148 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 POM121L12Q8N7R1 296 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 SNURFQ9Y675 71 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 IGHV1OR15-1A0A075B7D0 117 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 IGLV1-47P01700 117 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 TRBV12-3P01733 135 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 XCL1P47992 114 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 FAM223AQ8IWN6 122 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 XCL2Q9UBD3 114 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 IGIPA6NJ69 53 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 CTSGP08311 255 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 FAM222AQ5U5X8 452 aa5.05□□□□□ -1.6
TGFBR3-209ENST00000532540 IGHV4-4A0A075B6R2 117 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 LINC00336Q6ZUF6 198 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 SND1-IT1Q9HBX3 110 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 IGLV11-55A0A075B6I3 123 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 IGHV7-4-1A0A0J9YVY3 117 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 F8WEM9 126 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 COX8CQ7Z4L0 72 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 LINC00574Q9H8X3 128 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 C11orf21Q9P2W6 132 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 Q6ZSV7 163 aa5.04□□□□□ -1.6
TGFBR3-209ENST00000532540 IGLV4-3A0A075B6K6 122 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 TRAV7A0A075B6U4 112 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 CRYGDP07320 174 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 DEFB121Q5J5C9 76 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 C5orf38Q86SI9 138 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 EDN2P20800 178 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 NCR3O14931 201 aa5.03□□□□□ -1.6
TGFBR3-209ENST00000532540 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 OTOGQ6ZRI0 2925 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 IGKV2-29A2NJV5 120 aaPredicted RBP5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 FAM223BA6NKX1 122 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 PRB2P02812 416 aaPredicted RBP5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 SOSTDC1Q6X4U4 206 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 Q8N9W7 124 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 IGHV4OR15-8A0A075B7B6 117 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 A0A087WW49 117 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 IGHV7-81A0A0B4J1V7 117 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 TRBV27A0A0K0K1C4 114 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 C6orf226Q5I0X4 101 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 PIK3CD-AS1Q5SR53 167 aa5.02□□□□□ -1.61
TGFBR3-209ENST00000532540 NSD1Q96L73 2696 aaPredicted RBP5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 IGHV3-38A0A0C4DH36 116 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 RHPN1-AS1Q9BWJ2 59 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 WFDC9Q8NEX5 89 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 C18orf65Q6ZTR6 163 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 DCANP1Q8TF63 244 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 LINC00846Q9NV44 126 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 KLK9Q9UKQ9 250 aa5.01□□□□□ -1.61
TGFBR3-209ENST00000532540 TMEM256-PLSCR3K7ERE1 68 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 NDUFA1O15239 70 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 SMAD5-AS1Q9Y6J3 95 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 A8MZ25 164 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 SLURP1P55000 103 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 ADAMTSL4-AS1Q5T5F5 129 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 SMCR5Q8TEV8 140 aa5□□□□□ -1.61
TGFBR3-209ENST00000532540 TRBV6-5A0A0K0K1A5 114 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 C5orf56Q8N8D9 126 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 ESM1Q9NQ30 184 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 SPINK13Q1W4C9 94 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 MXRA5Q9NR99 2828 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 SLPIP03973 132 aa4.99□□□□□ -1.61
TGFBR3-209ENST00000532540 ODF3BA8MYP8 253 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 TSHBP01222 138 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 MIFP14174 115 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms