RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 SMKR1H3BMG3 65 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 TNFRSF6BO95407 300 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 CHTF8P0CG12 524 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 HBBP68871 147 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 TMEM136Q6ZRR5 245 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 ATP5L2Q7Z4Y8 100 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 C2orf48Q96LS8 159 aa4.95□□□□□ -1.62
CCDC90B-212ENST00000529312 A0A1B0GVG6 124 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 C9JQL5 133 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 MT-ND4LP03901 98 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 G0S2P27469 103 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 PNRC1Q12796 327 aaPredicted RBP4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 RNF151Q2KHN1 245 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 ORMDL3Q8N138 153 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 ANAPC16Q96DE5 110 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 CAMK2N2Q96S95 79 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 SPANXA1Q9NS26 97 aa4.94□□□□□ -1.62
CCDC90B-212ENST00000529312 D6R8Y8 96 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 MRPS36P82909 103 aaKnown RBP4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 SRSF3P84103 164 aaKnown RBP4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 GAGE2BQ13066 116 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 MRPL54Q6P161 138 aaKnown RBP4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 Q6ZRP5 223 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 C5orf38Q86SI9 138 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 IMMP2LQ96T52 175 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 SMIM2Q9BVW6 85 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 LAMTOR2Q9Y2Q5 125 aa4.93□□□□□ -1.62
CCDC90B-212ENST00000529312 A0A096LNI7 61 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 PRSS47A8MTI9 375 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 IFI27P40305 119 aaPredicted RBP4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 REG3GQ6UW15 175 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 SPINK6Q6UWN8 80 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 OR10D4PQ8NGN7 298 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 LINC00526Q96FQ7 95 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 PRELID3AQ96N28 172 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 PLA2G2DQ9UNK4 145 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 PYGO1Q9Y3Y4 419 aa4.92□□□□□ -1.62
CCDC90B-212ENST00000529312 A0A1B0GXF2 115 aa4.91□□□□□ -1.62
CCDC90B-212ENST00000529312 K7EMI3 77 aa4.91□□□□□ -1.62
CCDC90B-212ENST00000529312 HNRNPA3P51991 378 aaKnown RBP4.91□□□□□ -1.62
CCDC90B-212ENST00000529312 HERC1Q15751 4861 aa4.91□□□□□ -1.62
CCDC90B-212ENST00000529312 TGIF2-C20orf24A0A0A6YYL0 155 aa4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 IGHV3OR16-9A0A0B4J2B5 98 aa4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 NDUFA1O15239 70 aa4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 NPYP01303 97 aa4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 RPL39P62891 51 aaKnown RBP4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 RNASE13Q5GAN3 156 aaKnown RBP4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 PAPPA-AS1Q5QFB9 102 aa4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 MAP1LC3AQ9H492 121 aa4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 MRPL35Q9NZE8 188 aaKnown RBP4.9□□□□□ -1.63
CCDC90B-212ENST00000529312 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 NPSP0C0P6 89 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 ORMDL2Q53FV1 153 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 Q6ZN92 141 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 Q6ZUT4 128 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 LINC01561Q8N1V8 128 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 Q8N8P6 123 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 ORAOV1Q8WV07 137 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 TMEM141Q96I45 108 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 C2orf88Q9BSF0 95 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 VCX2Q9H322 139 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 CYSLTR1Q9Y271 337 aa4.89□□□□□ -1.63
CCDC90B-212ENST00000529312 LOC389332A0A1B0GUA5 103 aa4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 SEC11AP67812 179 aa4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 SRSF9Q13242 221 aaKnown RBP eCLIP4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 TEX43Q6ZNM6 134 aa4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 OPRPNQ99935 248 aaPredicted RBP4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 NXT2Q9NPJ8 142 aaKnown RBP4.88□□□□□ -1.63
CCDC90B-212ENST00000529312 A0A087WZ39 114 aa4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 LINC01549A6NIU2 74 aa4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 MT-ND6P03923 174 aa4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 RPL18AQ02543 176 aaKnown RBP4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 PACRGQ96M98 296 aaPredicted RBP4.87□□□□□ -1.63
CCDC90B-212ENST00000529312 TRAV9-1A0A075B6T8 112 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 A0A0J9YXV3 536 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 TRBV30A0A0K0K1B3 111 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 A0A1W2PNN7 141 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 PRSS2P07478 247 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 C6orf226Q5I0X4 101 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 CLLU1Q5K131 121 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 UQCC3Q6UW78 93 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 C2orf66Q6UXQ4 117 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 FAM104AQ969W3 186 aa4.86□□□□□ -1.63
CCDC90B-212ENST00000529312 IGLV4-3A0A075B6K6 122 aa4.85□□□□□ -1.63
CCDC90B-212ENST00000529312 EIF4EBP3O60516 100 aaPredicted RBP4.85□□□□□ -1.63
CCDC90B-212ENST00000529312 S100PP25815 95 aa4.85□□□□□ -1.63
CCDC90B-212ENST00000529312 CKS1BP61024 79 aa4.85□□□□□ -1.63
CCDC90B-212ENST00000529312 COX19Q49B96 90 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms