RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 C20orf203Q8NBC4 194 aa9.2□□□□□ -0.94
CAPN1-212ENST00000527887 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
CAPN1-212ENST00000527887 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
CAPN1-212ENST00000527887 UBE2L6O14933 153 aa9.19□□□□□ -0.94
CAPN1-212ENST00000527887 LEPROTL1O95214 131 aa9.19□□□□□ -0.94
CAPN1-212ENST00000527887 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-212ENST00000527887 FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
CAPN1-212ENST00000527887 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
CAPN1-212ENST00000527887 A0A096LNJ9 63 aa9.17□□□□□ -0.94
CAPN1-212ENST00000527887 I3L3M4 83 aa9.17□□□□□ -0.94
CAPN1-212ENST00000527887 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
CAPN1-212ENST00000527887 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
CAPN1-212ENST00000527887 H7C423 109 aa9.16□□□□□ -0.94
CAPN1-212ENST00000527887 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
CAPN1-212ENST00000527887 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-212ENST00000527887 ATP5LO75964 103 aa9.15□□□□□ -0.94
CAPN1-212ENST00000527887 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-212ENST00000527887 CFAP161Q6P656 301 aa9.15□□□□□ -0.94
CAPN1-212ENST00000527887 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
CAPN1-212ENST00000527887 TOMM6Q96B49 74 aa9.15□□□□□ -0.94
CAPN1-212ENST00000527887 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
CAPN1-212ENST00000527887 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
CAPN1-212ENST00000527887 NPSP0C0P6 89 aa9.14□□□□□ -0.95
CAPN1-212ENST00000527887 C3orf79P0CE67 100 aa9.14□□□□□ -0.95
CAPN1-212ENST00000527887 PYY3Q5JQD4 70 aa9.14□□□□□ -0.95
CAPN1-212ENST00000527887 PET117Q6UWS5 81 aa9.14□□□□□ -0.95
CAPN1-212ENST00000527887 LINC00518Q8N0U6 118 aa9.14□□□□□ -0.95
CAPN1-212ENST00000527887 OXTP01178 125 aa9.13□□□□□ -0.95
CAPN1-212ENST00000527887 TSHBP01222 138 aa9.13□□□□□ -0.95
CAPN1-212ENST00000527887 ERASQ7Z444 233 aa9.13□□□□□ -0.95
CAPN1-212ENST00000527887 CYSLTR1Q9Y271 337 aa9.13□□□□□ -0.95
CAPN1-212ENST00000527887 IGHV3-64A0A075B6Q5 118 aa9.12□□□□□ -0.95
CAPN1-212ENST00000527887 SYS1-DBNDD2H3BUS1 97 aa9.12□□□□□ -0.95
CAPN1-212ENST00000527887 KRTDAPP60985 99 aa9.12□□□□□ -0.95
CAPN1-212ENST00000527887 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
CAPN1-212ENST00000527887 AMMECR1LQ6DCA0 310 aa9.12□□□□□ -0.95
CAPN1-212ENST00000527887 IFI27L1Q96BM0 104 aa9.12□□□□□ -0.95
CAPN1-212ENST00000527887 C20orf202A1L168 122 aa9.11□□□□□ -0.95
CAPN1-212ENST00000527887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-212ENST00000527887 ZNF25P17030 456 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-212ENST00000527887 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
CAPN1-212ENST00000527887 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
CAPN1-212ENST00000527887 C2orf66Q6UXQ4 117 aa9.11□□□□□ -0.95
CAPN1-212ENST00000527887 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
CAPN1-212ENST00000527887 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
CAPN1-212ENST00000527887 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
CAPN1-212ENST00000527887 C12orf57Q99622 126 aa9.1□□□□□ -0.95
CAPN1-212ENST00000527887 PYGO1Q9Y3Y4 419 aa9.1□□□□□ -0.95
CAPN1-212ENST00000527887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-212ENST00000527887 GAGE12HA6NDE8 117 aa9.09□□□□□ -0.95
CAPN1-212ENST00000527887 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
CAPN1-212ENST00000527887 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
CAPN1-212ENST00000527887 LINC01545Q5VT33 79 aa9.09□□□□□ -0.95
CAPN1-212ENST00000527887 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
CAPN1-212ENST00000527887 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
CAPN1-212ENST00000527887 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
CAPN1-212ENST00000527887 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
CAPN1-212ENST00000527887 IGIPA6NJ69 53 aa9.08□□□□□ -0.96
CAPN1-212ENST00000527887 FGF6P10767 208 aa9.08□□□□□ -0.96
CAPN1-212ENST00000527887 SERTAD4-AS1Q5TG53 156 aa9.08□□□□□ -0.96
CAPN1-212ENST00000527887 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
CAPN1-212ENST00000527887 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 SLPIP03973 132 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 S100A12P80511 92 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
CAPN1-212ENST00000527887 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
CAPN1-212ENST00000527887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
CAPN1-212ENST00000527887 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
CAPN1-212ENST00000527887 PANO1I0J062 215 aa9.06□□□□□ -0.96
CAPN1-212ENST00000527887 Q6ZN92 141 aa9.06□□□□□ -0.96
CAPN1-212ENST00000527887 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
CAPN1-212ENST00000527887 CHCHD10Q8WYQ3 142 aaPredicted RBP9.06□□□□□ -0.96
CAPN1-212ENST00000527887 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
CAPN1-212ENST00000527887 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
CAPN1-212ENST00000527887 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
CAPN1-212ENST00000527887 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-212ENST00000527887 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
CAPN1-212ENST00000527887 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
CAPN1-212ENST00000527887 A0A087WYN8 130 aa9.03□□□□□ -0.96
CAPN1-212ENST00000527887 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
CAPN1-212ENST00000527887 FOXI1Q12951 378 aa9.03□□□□□ -0.96
CAPN1-212ENST00000527887 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
CAPN1-212ENST00000527887 PKHD1L1Q86WI1 4243 aa9.03□□□□□ -0.96
CAPN1-212ENST00000527887 LINC00959A0A1B0GUT2 108 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 CCL25O15444 150 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 PLNP26678 52 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 RPL39P62891 51 aaKnown RBP9.02□□□□□ -0.97
CAPN1-212ENST00000527887 ODF1Q14990 250 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 SS18Q15532 418 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 Q6ZRU5 148 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
CAPN1-212ENST00000527887 IGHV1-58A0A0C4DH39 117 aa9.01□□□□□ -0.97
CAPN1-212ENST00000527887 COX6A2Q02221 97 aa9.01□□□□□ -0.97
CAPN1-212ENST00000527887 PMVKQ15126 192 aa9.01□□□□□ -0.97
CAPN1-212ENST00000527887 HIGD2BQ4VC39 106 aa9.01□□□□□ -0.97
CAPN1-212ENST00000527887 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
CAPN1-212ENST00000527887 UBE2D4Q9Y2X8 147 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms