RNA–Protein interactions for RNA: ENST00000524998.1

RECQL4-202, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-202ENST00000524998 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
RECQL4-202ENST00000524998 RPL39P62891 51 aaKnown RBP12.16□□□□□ -0.46
RECQL4-202ENST00000524998 RPL32P62910 135 aaKnown RBP12.16□□□□□ -0.46
RECQL4-202ENST00000524998 IMMP2LQ96T52 175 aa12.16□□□□□ -0.46
RECQL4-202ENST00000524998 SPANXA1Q9NS26 97 aa12.16□□□□□ -0.46
RECQL4-202ENST00000524998 PEA15Q15121 130 aa12.15□□□□□ -0.46
RECQL4-202ENST00000524998 C1orf137Q5JT78 98 aa12.15□□□□□ -0.46
RECQL4-202ENST00000524998 SMIM2Q9BVW6 85 aa12.15□□□□□ -0.46
RECQL4-202ENST00000524998 IFITM10A6NMD0 228 aa12.14□□□□□ -0.47
RECQL4-202ENST00000524998 D6R8Y8 96 aa12.14□□□□□ -0.47
RECQL4-202ENST00000524998 F8WDY8 70 aa12.14□□□□□ -0.47
RECQL4-202ENST00000524998 NDUFA1O15239 70 aa12.14□□□□□ -0.47
RECQL4-202ENST00000524998 HBBP68871 147 aa12.14□□□□□ -0.47
RECQL4-202ENST00000524998 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
RECQL4-202ENST00000524998 MRPL35Q9NZE8 188 aaKnown RBP12.14□□□□□ -0.47
RECQL4-202ENST00000524998 PHF5AQ7RTV0 110 aaKnown RBP12.13□□□□□ -0.47
RECQL4-202ENST00000524998 RAB5AP20339 215 aa12.12□□□□□ -0.47
RECQL4-202ENST00000524998 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
RECQL4-202ENST00000524998 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
RECQL4-202ENST00000524998 IGHV3OR16-9A0A0B4J2B5 98 aa12.11□□□□□ -0.47
RECQL4-202ENST00000524998 PPBPP02775 128 aa12.11□□□□□ -0.47
RECQL4-202ENST00000524998 A0A087WZ39 114 aa12.1□□□□□ -0.47
RECQL4-202ENST00000524998 C9JQL5 133 aa12.1□□□□□ -0.47
RECQL4-202ENST00000524998 NPYP01303 97 aa12.09□□□□□ -0.47
RECQL4-202ENST00000524998 IFI27P40305 119 aaPredicted RBP12.09□□□□□ -0.47
RECQL4-202ENST00000524998 DIRC1Q969H9 104 aa12.09□□□□□ -0.47
RECQL4-202ENST00000524998 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
RECQL4-202ENST00000524998 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
RECQL4-202ENST00000524998 UNQ6190/PRO20217Q6UXQ8 127 aa12.07□□□□□ -0.48
RECQL4-202ENST00000524998 FAM19A5Q7Z5A7 132 aaPredicted RBP12.07□□□□□ -0.48
RECQL4-202ENST00000524998 ORMDL3Q8N138 153 aa12.07□□□□□ -0.48
RECQL4-202ENST00000524998 GAGE2DQ9UEU5 116 aa12.07□□□□□ -0.48
RECQL4-202ENST00000524998 SRSF3P84103 164 aaKnown RBP12.06□□□□□ -0.48
RECQL4-202ENST00000524998 C10orf25Q5T742 122 aa12.06□□□□□ -0.48
RECQL4-202ENST00000524998 TMEM136Q6ZRR5 245 aa12.06□□□□□ -0.48
RECQL4-202ENST00000524998 FAM104AQ969W3 186 aa12.06□□□□□ -0.48
RECQL4-202ENST00000524998 A0A1B0GXF2 115 aa12.05□□□□□ -0.48
RECQL4-202ENST00000524998 FAM168BA1KXE4 195 aa12.05□□□□□ -0.48
RECQL4-202ENST00000524998 IGLV7-43P04211 117 aa12.05□□□□□ -0.48
RECQL4-202ENST00000524998 TLX1NBP0CAT3 122 aa12.05□□□□□ -0.48
RECQL4-202ENST00000524998 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
RECQL4-202ENST00000524998 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
RECQL4-202ENST00000524998 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
RECQL4-202ENST00000524998 UBE2BP63146 152 aa12.03□□□□□ -0.48
RECQL4-202ENST00000524998 TMEM141Q96I45 108 aa12.03□□□□□ -0.48
RECQL4-202ENST00000524998 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
RECQL4-202ENST00000524998 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
RECQL4-202ENST00000524998 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.49
RECQL4-202ENST00000524998 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
RECQL4-202ENST00000524998 LOC389332A0A1B0GUA5 103 aa12.01□□□□□ -0.49
RECQL4-202ENST00000524998 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
RECQL4-202ENST00000524998 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
RECQL4-202ENST00000524998 IGLV4-3A0A075B6K6 122 aa12□□□□□ -0.49
RECQL4-202ENST00000524998 TRBV30A0A0K0K1B3 111 aa12□□□□□ -0.49
RECQL4-202ENST00000524998 H0Y9J4 135 aa12□□□□□ -0.49
RECQL4-202ENST00000524998 M0QXV9 152 aa12□□□□□ -0.49
RECQL4-202ENST00000524998 Q6ZN92 141 aa12□□□□□ -0.49
RECQL4-202ENST00000524998 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
RECQL4-202ENST00000524998 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
RECQL4-202ENST00000524998 PRSS2P07478 247 aa11.98□□□□□ -0.49
RECQL4-202ENST00000524998 KIAA0087Q14695 138 aa11.98□□□□□ -0.49
RECQL4-202ENST00000524998 C2orf82Q6UX34 121 aa11.98□□□□□ -0.49
RECQL4-202ENST00000524998 CYSLTR1Q9Y271 337 aa11.98□□□□□ -0.49
RECQL4-202ENST00000524998 LAMTOR2Q9Y2Q5 125 aa11.98□□□□□ -0.49
RECQL4-202ENST00000524998 VCX2Q9H322 139 aa11.97□□□□□ -0.49
RECQL4-202ENST00000524998 CKS1BP61024 79 aa11.96□□□□□ -0.49
RECQL4-202ENST00000524998 KRTAP11-1Q8IUC1 163 aa11.96□□□□□ -0.49
RECQL4-202ENST00000524998 IGLV1-50A0A075B6I6 118 aa11.95□□□□□ -0.5
RECQL4-202ENST00000524998 A0A1B0GVG6 124 aa11.95□□□□□ -0.5
RECQL4-202ENST00000524998 UBE2D1P51668 147 aa11.95□□□□□ -0.5
RECQL4-202ENST00000524998 LINC01561Q8N1V8 128 aa11.95□□□□□ -0.5
RECQL4-202ENST00000524998 TOMM7Q9P0U1 55 aa11.95□□□□□ -0.5
RECQL4-202ENST00000524998 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
RECQL4-202ENST00000524998 Q8N8P6 123 aa11.94□□□□□ -0.5
RECQL4-202ENST00000524998 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
RECQL4-202ENST00000524998 MT-ND4LP03901 98 aa11.93□□□□□ -0.5
RECQL4-202ENST00000524998 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
RECQL4-202ENST00000524998 C6orf226Q5I0X4 101 aa11.93□□□□□ -0.5
RECQL4-202ENST00000524998 PNRC1Q12796 327 aaPredicted RBP11.91□□□□□ -0.5
RECQL4-202ENST00000524998 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
RECQL4-202ENST00000524998 ZC2HC1BQ5TFG8 222 aa11.91□□□□□ -0.5
RECQL4-202ENST00000524998 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
RECQL4-202ENST00000524998 RPL13AP40429 203 aaKnown RBP11.9□□□□□ -0.5
RECQL4-202ENST00000524998 PAPPA-AS1Q5QFB9 102 aa11.9□□□□□ -0.5
RECQL4-202ENST00000524998 ANAPC16Q96DE5 110 aa11.9□□□□□ -0.5
RECQL4-202ENST00000524998 ALKBH7Q9BT30 221 aaPredicted RBP11.9□□□□□ -0.5
RECQL4-202ENST00000524998 K7EMI3 77 aa11.89□□□□□ -0.51
RECQL4-202ENST00000524998 NPSP0C0P6 89 aa11.89□□□□□ -0.51
RECQL4-202ENST00000524998 G0S2P27469 103 aa11.89□□□□□ -0.51
RECQL4-202ENST00000524998 SEC11AP67812 179 aa11.89□□□□□ -0.51
RECQL4-202ENST00000524998 AMELXQ99217 191 aa11.89□□□□□ -0.51
RECQL4-202ENST00000524998 LBHQ53QV2 105 aaPredicted RBP11.88□□□□□ -0.51
RECQL4-202ENST00000524998 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
RECQL4-202ENST00000524998 Q8IZM0 81 aa11.88□□□□□ -0.51
RECQL4-202ENST00000524998 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
RECQL4-202ENST00000524998 CTDSP1Q9GZU7 261 aa11.88□□□□□ -0.51
RECQL4-202ENST00000524998 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
RECQL4-202ENST00000524998 HERVK_113P63121 156 aa11.87□□□□□ -0.51
RECQL4-202ENST00000524998 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
RECQL4-202ENST00000524998 KRTAP1-4P0C5Y4 121 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms