RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MBD3L1Q8WWY6 194 aa5.48□□□□□ -1.53
PTPN12-216ENST00000523952 SMIM12Q96EX1 92 aa5.48□□□□□ -1.53
PTPN12-216ENST00000523952 RPP21Q9H633 154 aaKnown RBP5.48□□□□□ -1.53
PTPN12-216ENST00000523952 MANBALQ9NQG1 85 aa5.48□□□□□ -1.53
PTPN12-216ENST00000523952 IGLV7-46A0A075B6I9 117 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 RAB19A4D1S5 217 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 UMAD1C9J7I0 102 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 TLX1NBP0CAT3 122 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 LINC00173Q6ZV60 143 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 BORCS7Q96B45 105 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 GNG13Q9P2W3 67 aa5.47□□□□□ -1.53
PTPN12-216ENST00000523952 TRBV6-5A0A0K0K1A5 114 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 ARPC5O15511 151 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 NUPR1O60356 82 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 RPL28P46779 137 aaKnown RBP5.46□□□□□ -1.54
PTPN12-216ENST00000523952 CCL20P78556 96 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 SRSF3P84103 164 aaKnown RBP5.46□□□□□ -1.54
PTPN12-216ENST00000523952 NUDT10Q8NFP7 164 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 C11orf52Q96A22 123 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 TMEM18Q96B42 140 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 NUDT11Q96G61 164 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 CNFNQ9BYD5 112 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 SMDT1Q9H4I9 107 aa5.46□□□□□ -1.54
PTPN12-216ENST00000523952 A0A087X002 238 aa5.45□□□□□ -1.54
PTPN12-216ENST00000523952 TEX46H3BTG2 121 aa5.45□□□□□ -1.54
PTPN12-216ENST00000523952 FOXA3P55318 350 aaPredicted RBP5.45□□□□□ -1.54
PTPN12-216ENST00000523952 UNQ6190/PRO20217Q6UXQ8 127 aa5.45□□□□□ -1.54
PTPN12-216ENST00000523952 LINC00304Q8N9R0 145 aa5.45□□□□□ -1.54
PTPN12-216ENST00000523952 RNASE7Q9H1E1 156 aaKnown RBP5.45□□□□□ -1.54
PTPN12-216ENST00000523952 MED9Q9NWA0 146 aa5.45□□□□□ -1.54
PTPN12-216ENST00000523952 C6orf48Q9UBA6 75 aa5.45□□□□□ -1.54
PTPN12-216ENST00000523952 C10orf25Q5T742 122 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 LINC00337Q8N6G1 96 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 PACRGQ96M98 296 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-216ENST00000523952 KIR2DL4Q99706 377 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 CTDSP1Q9GZU7 261 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 CYTL1Q9NRR1 136 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 CSDC2Q9Y534 153 aaKnown RBP5.44□□□□□ -1.54
PTPN12-216ENST00000523952 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
PTPN12-216ENST00000523952 TRBV27A0A0K0K1C4 114 aa5.43□□□□□ -1.54
PTPN12-216ENST00000523952 VCYO14598 125 aa5.43□□□□□ -1.54
PTPN12-216ENST00000523952 PDE6DO43924 150 aa5.43□□□□□ -1.54
PTPN12-216ENST00000523952 LBHQ53QV2 105 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-216ENST00000523952 Q6ZUT4 128 aa5.43□□□□□ -1.54
PTPN12-216ENST00000523952 TGIF2-C20orf24A0A0A6YYL0 155 aa5.42□□□□□ -1.54
PTPN12-216ENST00000523952 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
PTPN12-216ENST00000523952 NDUFC2-KCTD14E9PQ53 114 aa5.42□□□□□ -1.54
PTPN12-216ENST00000523952 POLR2KP53803 58 aaKnown RBP5.42□□□□□ -1.54
PTPN12-216ENST00000523952 PPDPFQ9H3Y8 114 aa5.42□□□□□ -1.54
PTPN12-216ENST00000523952 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
PTPN12-216ENST00000523952 TRBV20OR9-2A0A075B6H5 130 aa5.41□□□□□ -1.54
PTPN12-216ENST00000523952 IGKV2D-26A0A0A0MRZ7 120 aa5.41□□□□□ -1.54
PTPN12-216ENST00000523952 GATCO43716 136 aaKnown RBP5.41□□□□□ -1.54
PTPN12-216ENST00000523952 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
PTPN12-216ENST00000523952 KANTRA0A1W2PQU2 76 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 A8MWL6 223 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 SCGB1D1O95968 90 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 PPP1R17O96001 155 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 C9orf129Q5T035 196 aaKnown RBP5.4□□□□□ -1.54
PTPN12-216ENST00000523952 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 ANAPC11Q9NYG5 84 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
PTPN12-216ENST00000523952 IGHV3OR16-9A0A0B4J2B5 98 aa5.39□□□□□ -1.55
PTPN12-216ENST00000523952 BCE1O60756 84 aa5.39□□□□□ -1.55
PTPN12-216ENST00000523952 HBBP68871 147 aa5.39□□□□□ -1.55
PTPN12-216ENST00000523952 PPP1R2P9O14990 202 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 PRSS2P07478 247 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 RAB4AP20338 218 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 UBE2AP49459 152 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 SUMO2P61956 95 aaKnown RBP5.38□□□□□ -1.55
PTPN12-216ENST00000523952 LINC00242Q5T6M2 205 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 TMEM191AQ9H0A3 160 aa5.38□□□□□ -1.55
PTPN12-216ENST00000523952 A0A1B0GUT8 65 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 ZNF727A8MUV8 499 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 K7EN84 100 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 TCAPO15273 167 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
PTPN12-216ENST00000523952 CKS1BP61024 79 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 ZNF345Q14585 488 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 FAM229BQ4G0N7 80 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 MRPL55Q7Z7F7 128 aaKnown RBP5.37□□□□□ -1.55
PTPN12-216ENST00000523952 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 OCC1Q8TAD7 63 aa5.37□□□□□ -1.55
PTPN12-216ENST00000523952 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
PTPN12-216ENST00000523952 CTAG1AP78358 180 aa5.36□□□□□ -1.55
PTPN12-216ENST00000523952 XAGE1AQ9HD64 81 aa5.36□□□□□ -1.55
PTPN12-216ENST00000523952 SPANXA1Q9NS26 97 aa5.36□□□□□ -1.55
PTPN12-216ENST00000523952 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
PTPN12-216ENST00000523952 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
PTPN12-216ENST00000523952 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
PTPN12-216ENST00000523952 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
PTPN12-216ENST00000523952 HIGD1CA8MV81 97 aa5.34□□□□□ -1.55
PTPN12-216ENST00000523952 SMLR1H3BR10 107 aa5.34□□□□□ -1.55
PTPN12-216ENST00000523952 TAGLN2P37802 199 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms