RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
CDKL3-203ENST00000519312 ALKAL2Q6UX46 152 aa4.59□□□□□ -1.67
CDKL3-203ENST00000519312 TMEM101Q96IK0 257 aa4.59□□□□□ -1.67
CDKL3-203ENST00000519312 CDC42SE2Q9NRR3 84 aa4.59□□□□□ -1.67
CDKL3-203ENST00000519312 TMEM250H0YL14 139 aa4.58□□□□□ -1.68
CDKL3-203ENST00000519312 I3L3M4 83 aa4.58□□□□□ -1.68
CDKL3-203ENST00000519312 PHF5AQ7RTV0 110 aaKnown RBP4.58□□□□□ -1.68
CDKL3-203ENST00000519312 RPL39LQ96EH5 51 aaKnown RBP4.58□□□□□ -1.68
CDKL3-203ENST00000519312 CSDC2Q9Y534 153 aaKnown RBP4.58□□□□□ -1.68
CDKL3-203ENST00000519312 C1orf196B1AJZ1 125 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 F8WDY8 70 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 COX7A2LO14548 114 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 TSHBP01222 138 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 OCC1Q8TAD7 63 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 MRAP2Q96G30 205 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 CAMK2N2Q96S95 79 aa4.57□□□□□ -1.68
CDKL3-203ENST00000519312 MRPL35Q9NZE8 188 aaKnown RBP4.57□□□□□ -1.68
CDKL3-203ENST00000519312 CARHSP1Q9Y2V2 147 aaKnown RBP4.57□□□□□ -1.68
CDKL3-203ENST00000519312 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
CDKL3-203ENST00000519312 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
CDKL3-203ENST00000519312 K7EN84 100 aa4.56□□□□□ -1.68
CDKL3-203ENST00000519312 TLX1NBP0CAT3 122 aa4.56□□□□□ -1.68
CDKL3-203ENST00000519312 PRR4Q16378 134 aa4.56□□□□□ -1.68
CDKL3-203ENST00000519312 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
CDKL3-203ENST00000519312 RNASE7Q9H1E1 156 aaKnown RBP4.56□□□□□ -1.68
CDKL3-203ENST00000519312 RPP21Q9H633 154 aaKnown RBP4.56□□□□□ -1.68
CDKL3-203ENST00000519312 C7orf77A4D0Y5 90 aa4.55□□□□□ -1.68
CDKL3-203ENST00000519312 PMCHP20382 165 aa4.55□□□□□ -1.68
CDKL3-203ENST00000519312 POLR2KP53803 58 aaKnown RBP4.55□□□□□ -1.68
CDKL3-203ENST00000519312 RPL18AQ02543 176 aaKnown RBP4.55□□□□□ -1.68
CDKL3-203ENST00000519312 FAM231DQ6ZW35 169 aa4.55□□□□□ -1.68
CDKL3-203ENST00000519312 KRTAP11-1Q8IUC1 163 aa4.55□□□□□ -1.68
CDKL3-203ENST00000519312 OR10D4PQ8NGN7 298 aa4.55□□□□□ -1.68
CDKL3-203ENST00000519312 EIF5A2Q9GZV4 153 aaKnown RBP4.55□□□□□ -1.68
CDKL3-203ENST00000519312 A0A1B0GVG6 124 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 A8MWL6 223 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 GATCO43716 136 aaKnown RBP4.54□□□□□ -1.68
CDKL3-203ENST00000519312 UBE2D1P51668 147 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 CEBPGP53567 150 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 SPAG11BQ08648 103 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 SMAGPQ0VAQ4 97 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 IMMP2LQ96T52 175 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 TMEM242Q9NWH2 141 aa4.54□□□□□ -1.68
CDKL3-203ENST00000519312 A0A087WZ39 114 aa4.53□□□□□ -1.68
CDKL3-203ENST00000519312 FOXA3P55318 350 aaPredicted RBP4.53□□□□□ -1.68
CDKL3-203ENST00000519312 SMIM7Q9BQ49 75 aa4.53□□□□□ -1.68
CDKL3-203ENST00000519312 TIMM21Q9BVV7 248 aa4.53□□□□□ -1.68
CDKL3-203ENST00000519312 ST20Q9HBF5 79 aa4.53□□□□□ -1.68
CDKL3-203ENST00000519312 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
CDKL3-203ENST00000519312 ZNF727A8MUV8 499 aa4.52□□□□□ -1.69
CDKL3-203ENST00000519312 SRP19P09132 144 aaKnown RBP4.52□□□□□ -1.69
CDKL3-203ENST00000519312 TMEM241Q24JQ0 296 aa4.52□□□□□ -1.69
CDKL3-203ENST00000519312 LINC01551Q86U37 167 aa4.52□□□□□ -1.69
CDKL3-203ENST00000519312 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
CDKL3-203ENST00000519312 BORCS7Q96B45 105 aa4.52□□□□□ -1.69
CDKL3-203ENST00000519312 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
CDKL3-203ENST00000519312 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
CDKL3-203ENST00000519312 IGHV3OR16-9A0A0B4J2B5 98 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 FAM168BA1KXE4 195 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 NDUFA1O15239 70 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 FAM74A3Q4VXF1 159 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 C5orf38Q86SI9 138 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 TMEM191AQ9H0A3 160 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
CDKL3-203ENST00000519312 TRAV13-1A0A0B4J241 112 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 A0A1B0GUT8 65 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 HIGD1CA8MV81 97 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 M0QXV9 152 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 VCYO14598 125 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 ZNF861PO60384 105 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 PPP1R17O96001 155 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 Q6ZUT4 128 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 C6orf48Q9UBA6 75 aa4.5□□□□□ -1.69
CDKL3-203ENST00000519312 IFITM10A6NMD0 228 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 NUPR1O60356 82 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 RAB4AP20338 218 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 CTAG1AP78358 180 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 PEA15Q15121 130 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 FAM19A5Q7Z5A7 132 aaPredicted RBP4.49□□□□□ -1.69
CDKL3-203ENST00000519312 ORAOV1Q8WV07 137 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 NAT8Q9UHE5 227 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 V9GYV3 84 aa4.49□□□□□ -1.69
CDKL3-203ENST00000519312 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 PPP1R2P9O14990 202 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 FCER1GP30273 86 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 RPL23P62829 140 aaKnown RBP4.48□□□□□ -1.69
CDKL3-203ENST00000519312 RPL32P62910 135 aaKnown RBP4.48□□□□□ -1.69
CDKL3-203ENST00000519312 UBE2BP63146 152 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 MRPS36P82909 103 aaKnown RBP4.48□□□□□ -1.69
CDKL3-203ENST00000519312 RIGQ13278 110 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 UNQ6190/PRO20217Q6UXQ8 127 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 KIR2DL4Q99706 377 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
CDKL3-203ENST00000519312 A0A087X002 238 aa4.47□□□□□ -1.69
CDKL3-203ENST00000519312 C9JQL5 133 aa4.47□□□□□ -1.69
CDKL3-203ENST00000519312 NDUFC2-KCTD14E9PQ53 114 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms