RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 PRR3P79522 188 aaKnown RBP5.47□□□□□ -1.53
TRIM35-202ENST00000519219 LINC01600Q96MT4 127 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 TMEM243Q9BU79 118 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 ST20Q9HBF5 79 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 NXT2Q9NPJ8 142 aaKnown RBP5.47□□□□□ -1.53
TRIM35-202ENST00000519219 AP5S1Q9NUS5 200 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 TRAV8-4A0A0B4J246 113 aa5.46□□□□□ -1.54
TRIM35-202ENST00000519219 IGKV3OR2-268A0A0C4DH90 116 aa5.46□□□□□ -1.54
TRIM35-202ENST00000519219 LINC00614P0C842 121 aa5.46□□□□□ -1.54
TRIM35-202ENST00000519219 IFI27P40305 119 aaPredicted RBP5.46□□□□□ -1.54
TRIM35-202ENST00000519219 MAJINQ3KP22 176 aa5.46□□□□□ -1.54
TRIM35-202ENST00000519219 RPL39LQ96EH5 51 aaKnown RBP5.46□□□□□ -1.54
TRIM35-202ENST00000519219 PACRGQ96M98 296 aaPredicted RBP5.46□□□□□ -1.54
TRIM35-202ENST00000519219 A0A096LNI7 61 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.45□□□□□ -1.54
TRIM35-202ENST00000519219 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 ESDP10768 282 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 SUMO2P61956 95 aaKnown RBP5.45□□□□□ -1.54
TRIM35-202ENST00000519219 Q8N8P6 123 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 NRACQ8N912 160 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 OR10D4PQ8NGN7 298 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 HIST1H2BLQ99880 126 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 C20orf78Q9BR46 151 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 SMIM2Q9BVW6 85 aa5.45□□□□□ -1.54
TRIM35-202ENST00000519219 A0A0J9YXV3 536 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 FCER1GP30273 86 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 PMCHL1Q16048 86 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 FAM19A2Q8N3H0 131 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 STPG4Q8N801 248 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 C7orf33Q8WU49 177 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 LINC00526Q96FQ7 95 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 KIR2DL4Q99706 377 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 NIT2Q9NQR4 276 aa5.44□□□□□ -1.54
TRIM35-202ENST00000519219 VCYO14598 125 aa5.43□□□□□ -1.54
TRIM35-202ENST00000519219 NUPR1O60356 82 aa5.43□□□□□ -1.54
TRIM35-202ENST00000519219 HBDP02042 147 aa5.43□□□□□ -1.54
TRIM35-202ENST00000519219 LINC00310P59036 64 aa5.43□□□□□ -1.54
TRIM35-202ENST00000519219 ORMDL2Q53FV1 153 aa5.43□□□□□ -1.54
TRIM35-202ENST00000519219 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
TRIM35-202ENST00000519219 HSPB8Q9UJY1 196 aa5.43□□□□□ -1.54
TRIM35-202ENST00000519219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.42□□□□□ -1.54
TRIM35-202ENST00000519219 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
TRIM35-202ENST00000519219 TRBV6-5A0A0K0K1A5 114 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 IGKV2-29A2NJV5 120 aaPredicted RBP5.42□□□□□ -1.54
TRIM35-202ENST00000519219 SDHAF1A6NFY7 115 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 IFITM10A6NMD0 228 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 K7EMI3 77 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 TCAPO15273 167 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 LEPROTL1O95214 131 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 G0S2P27469 103 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 KRTDAPP60985 99 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 FOXI1Q12951 378 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 URB1-AS1Q96HZ7 61 aa5.42□□□□□ -1.54
TRIM35-202ENST00000519219 C20orf202A1L168 122 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 PRSS47A8MTI9 375 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 H0Y8G0 127 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 I3L3M4 83 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 UBE2L6O14933 153 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
TRIM35-202ENST00000519219 COTL1Q14019 142 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 MAP1LC3CQ9BXW4 147 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 LPAP08519 4548 aa5.41□□□□□ -1.54
TRIM35-202ENST00000519219 SMIM6P0DI80 62 aa5.4□□□□□ -1.54
TRIM35-202ENST00000519219 RPL32P62910 135 aaKnown RBP5.4□□□□□ -1.54
TRIM35-202ENST00000519219 CFAP161Q6P656 301 aa5.4□□□□□ -1.54
TRIM35-202ENST00000519219 TRBV27A0A0K0K1C4 114 aa5.39□□□□□ -1.55
TRIM35-202ENST00000519219 LINC01549A6NIU2 74 aa5.39□□□□□ -1.55
TRIM35-202ENST00000519219 XCL1P47992 114 aa5.39□□□□□ -1.55
TRIM35-202ENST00000519219 SPINK6Q6UWN8 80 aa5.39□□□□□ -1.55
TRIM35-202ENST00000519219 CYSLTR1Q9Y271 337 aa5.39□□□□□ -1.55
TRIM35-202ENST00000519219 LINC01546A6NGU7 62 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 ATP5LO75964 103 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 FGF6P10767 208 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 POLR2KP53803 58 aaKnown RBP5.38□□□□□ -1.55
TRIM35-202ENST00000519219 AMMECR1LQ6DCA0 310 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 C2orf66Q6UXQ4 117 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 Q6ZN92 141 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
TRIM35-202ENST00000519219 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
TRIM35-202ENST00000519219 CCL25O15444 150 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 TSHBP01222 138 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 C3orf79P0CE67 100 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 S100A12P80511 92 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 JOSD1Q15040 202 aaPredicted RBP5.37□□□□□ -1.55
TRIM35-202ENST00000519219 REG3GQ6UW15 175 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 IFI27L1Q96BM0 104 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 CARD19Q96LW7 228 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 C12orf57Q99622 126 aa5.37□□□□□ -1.55
TRIM35-202ENST00000519219 A0A096LNJ9 63 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 SYS1-DBNDD2H3BUS1 97 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 SMAGPQ0VAQ4 97 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 PET117Q6UWS5 81 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 Q6ZRP5 223 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 LINC00173Q6ZV60 143 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms