RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	FCER1G	P30273	86 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	CCL20	P78556	96 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	TMEM241	Q24JQ0	296 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	KRTAP13-2	Q52LG2	175 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	C9orf129	Q5T035	196 aa	Known RBP	6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	NUDT10	Q8NFP7	164 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	NUDT11	Q96G61	164 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	PPDPF	Q9H3Y8	114 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	GNG13	Q9P2W3	67 aa		6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	CSDC2	Q9Y534	153 aa	Known RBP	6.06	□□□□□ -1.44
CLDND1-231	ENST00000515620	TRBV27	A0A0K0K1C4	114 aa		6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	RPL28	P46779	137 aa	Known RBP	6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	FAM210A	Q96ND0	272 aa		6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	KRTAP4-1	Q9BYQ7	146 aa		6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	MANBAL	Q9NQG1	85 aa		6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	BIN3	Q9NQY0	253 aa		6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	NDUFA13	Q9P0J0	144 aa		6.05	□□□□□ -1.44
CLDND1-231	ENST00000515620	UMAD1	C9J7I0	102 aa		6.04	□□□□□ -1.44
CLDND1-231	ENST00000515620	ARPC5	O15511	151 aa		6.04	□□□□□ -1.44
CLDND1-231	ENST00000515620	POLR2K	P53803	58 aa	Known RBP	6.04	□□□□□ -1.44
CLDND1-231	ENST00000515620	SMAGP	Q0VAQ4	97 aa		6.04	□□□□□ -1.44
CLDND1-231	ENST00000515620	IGHV3OR16-9	A0A0B4J2B5	98 aa		6.03	□□□□□ -1.44
CLDND1-231	ENST00000515620	NDUFC2-KCTD14	E9PQ53	114 aa		6.03	□□□□□ -1.44
CLDND1-231	ENST00000515620	ASB16-AS1	Q495Z4	193 aa		6.03	□□□□□ -1.44
CLDND1-231	ENST00000515620	BCE1	O60756	84 aa		6.02	□□□□□ -1.45
CLDND1-231	ENST00000515620	TRBV30	A0A0K0K1B3	111 aa		6.01	□□□□□ -1.45
CLDND1-231	ENST00000515620	LINC00242	Q5T6M2	205 aa		6.01	□□□□□ -1.45
CLDND1-231	ENST00000515620	C2orf82	Q6UX34	121 aa		6.01	□□□□□ -1.45
CLDND1-231	ENST00000515620	MED9	Q9NWA0	146 aa		6.01	□□□□□ -1.45
CLDND1-231	ENST00000515620	C22orf24	Q9Y442	160 aa		6.01	□□□□□ -1.45
CLDND1-231	ENST00000515620	SMKR1	H3BMG3	65 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620		K7EN84	100 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	VCY	O14598	125 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	PDE6D	O43924	150 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	KIAA0087	Q14695	138 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	LBH	Q53QV2	105 aa	Predicted RBP	6	□□□□□ -1.45
CLDND1-231	ENST00000515620	LINC00337	Q8N6G1	96 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	LINC00469	Q8N7U9	141 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	PACRG	Q96M98	296 aa	Predicted RBP	6	□□□□□ -1.45
CLDND1-231	ENST00000515620	TIMM21	Q9BVV7	248 aa		6	□□□□□ -1.45
CLDND1-231	ENST00000515620	IGKV2D-26	A0A0A0MRZ7	120 aa		5.99	□□□□□ -1.45
CLDND1-231	ENST00000515620	FAM229B	Q4G0N7	80 aa		5.99	□□□□□ -1.45
CLDND1-231	ENST00000515620	TMEM18	Q96B42	140 aa		5.99	□□□□□ -1.45
CLDND1-231	ENST00000515620	KIR2DL4	Q99706	377 aa		5.99	□□□□□ -1.45
CLDND1-231	ENST00000515620	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	IFITM10	A6NMD0	228 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	PRSS47	A8MTI9	375 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	RAB4A	P20338	218 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	RPL39	P62891	51 aa	Known RBP	5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	MRPL55	Q7Z7F7	128 aa	Known RBP	5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	AMN1	Q8IY45	258 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	FAM104A	Q969W3	186 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	BORCS7	Q96B45	105 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	XAGE1A	Q9HD64	81 aa		5.98	□□□□□ -1.45
CLDND1-231	ENST00000515620	KRTAP9-7	A8MTY7	169 aa		5.97	□□□□□ -1.45
CLDND1-231	ENST00000515620	SUMO2	P61956	95 aa	Known RBP	5.97	□□□□□ -1.45
CLDND1-231	ENST00000515620	KRTAP13-3	Q3SY46	172 aa		5.97	□□□□□ -1.45
CLDND1-231	ENST00000515620	TMEM191A	Q9H0A3	160 aa		5.97	□□□□□ -1.45
CLDND1-231	ENST00000515620	RPL37AP8	A6NKH3	93 aa		5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	ZNF727	A8MUV8	499 aa		5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	GATC	O43716	136 aa	Known RBP	5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	SEC61B	P60468	96 aa	Known RBP	5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	HBB	P68871	147 aa		5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	CTAG1A	P78358	180 aa		5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	NRAC	Q8N912	160 aa		5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620	OCC1	Q8TAD7	63 aa		5.96	□□□□□ -1.46
CLDND1-231	ENST00000515620		A0A1B0GUT8	65 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620		A8MWL6	223 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	SMLR1	H3BR10	107 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	UBE2A	P49459	152 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	ZNF345	Q14585	488 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	FP248	Q71RG6	208 aa	Predicted RBP	5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	SPANXA1	Q9NS26	97 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	TP73-AS1	Q9UF72	201 aa		5.95	□□□□□ -1.46
CLDND1-231	ENST00000515620	TEX46	H3BTG2	121 aa		5.94	□□□□□ -1.46
CLDND1-231	ENST00000515620	PPP1R17	O96001	155 aa		5.94	□□□□□ -1.46
CLDND1-231	ENST00000515620	MRPS36	P82909	103 aa	Known RBP	5.94	□□□□□ -1.46
CLDND1-231	ENST00000515620	KRTAP13-1	Q8IUC0	172 aa		5.94	□□□□□ -1.46
CLDND1-231	ENST00000515620	GAGE10	A6NGK3	116 aa		5.93	□□□□□ -1.46
CLDND1-231	ENST00000515620	CFC1B	P0CG36	223 aa		5.93	□□□□□ -1.46
CLDND1-231	ENST00000515620	MT1H	P80294	61 aa		5.93	□□□□□ -1.46
CLDND1-231	ENST00000515620	LINC00167	Q96N53	147 aa		5.93	□□□□□ -1.46
CLDND1-231	ENST00000515620	KANTR	A0A1W2PQU2	76 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	HIGD1C	A8MV81	97 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	PPP1R2P9	O14990	202 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	PRSS2	P07478	247 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	CKS1B	P61024	79 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	ANKRD39	Q53RE8	183 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	C3orf22	Q8N5N4	141 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	TOMM7	Q9P0U1	55 aa		5.92	□□□□□ -1.46
CLDND1-231	ENST00000515620	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.91	□□□□□ -1.46
CLDND1-231	ENST00000515620	CT83	Q5H943	113 aa		5.91	□□□□□ -1.46
CLDND1-231	ENST00000515620	FAM231D	Q6ZW35	169 aa		5.91	□□□□□ -1.46
CLDND1-231	ENST00000515620	KRTAP4-12	Q9BQ66	201 aa		5.91	□□□□□ -1.46
CLDND1-231	ENST00000515620	RPL32	P62910	135 aa	Known RBP	5.9	□□□□□ -1.46
CLDND1-231	ENST00000515620	TCAP	O15273	167 aa		5.89	□□□□□ -1.47
CLDND1-231	ENST00000515620	PRLH	P81277	87 aa		5.89	□□□□□ -1.47
CLDND1-231	ENST00000515620	PNRC1	Q12796	327 aa	Predicted RBP	5.89	□□□□□ -1.47
CLDND1-231	ENST00000515620	KRTAP19-2	Q3LHN2	52 aa		5.89	□□□□□ -1.47
CLDND1-231	ENST00000515620	C6orf226	Q5I0X4	101 aa		5.89	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms