RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, human

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3B-208	ENST00000512928	RNASE13	Q5GAN3	156 aa	Known RBP	4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	MRPL52	Q86TS9	123 aa	Known RBP	4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	ZNF664	Q8N3J9	261 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	C15orf56	Q8N910	161 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	C9orf163	Q8N9P6	203 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	TRAV13-1	A0A0B4J241	112 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	LINC00959	A0A1B0GUT2	108 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928		K7EMI3	77 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	TCAP	O15273	167 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	MAL	P21145	153 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	CNBP	P62633	177 aa	Known RBP	4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	FOXI1	Q12951	378 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	TMEM18	Q96B42	140 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	URB1-AS1	Q96HZ7	61 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	PRELID3A	Q96N28	172 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	TIMM21	Q9BVV7	248 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	CDC42SE2	Q9NRR3	84 aa		4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	CSDC2	Q9Y534	153 aa	Known RBP	4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.19	□□□□□ -1.74
KDM3B-208	ENST00000512928	IGKV2-24	A0A0C4DH68	120 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	C1orf196	B1AJZ1	125 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	PANO1	I0J062	215 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	ZNF561-AS1	K7EIQ3	104 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	CHTF8	P0CG12	524 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	RAB5A	P20339	215 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	RAB5B	P61020	215 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	RPL37A	P61513	92 aa	Known RBP	4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	SDIM1	Q6ZPB5	146 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928		Q6ZUT4	128 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928		Q8N8P6	123 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	LINC00526	Q96FQ7	95 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	MRPL18	Q9H0U6	180 aa	Known RBP	4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928	UBE2D4	Q9Y2X8	147 aa		4.18	□□□□□ -1.74
KDM3B-208	ENST00000512928		A0A096LNJ9	63 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	IGHV1-58	A0A0C4DH39	117 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	LOC389332	A0A1B0GUA5	103 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	COX7A2L	O14548	114 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	SCO1	O75880	301 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	SLPI	P03973	132 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	NPS	P0C0P6	89 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	LINC00310	P59036	64 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	RPL39	P62891	51 aa	Known RBP	4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	COX6A2	Q02221	97 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	LBH	Q53QV2	105 aa	Predicted RBP	4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	XP32	Q5T750	250 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	CD164L2	Q6UWJ8	174 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	C18orf32	Q8TCD1	76 aa		4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	NXT2	Q9NPJ8	142 aa	Known RBP	4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.17	□□□□□ -1.74
KDM3B-208	ENST00000512928	MRPS36	P82909	103 aa	Known RBP	4.16	□□□□□ -1.74
KDM3B-208	ENST00000512928	KIAA1644	Q3SXP7	199 aa		4.16	□□□□□ -1.74
KDM3B-208	ENST00000512928	CARD19	Q96LW7	228 aa		4.16	□□□□□ -1.74
KDM3B-208	ENST00000512928	MAP1LC3A	Q9H492	121 aa		4.16	□□□□□ -1.74
KDM3B-208	ENST00000512928	PYGO1	Q9Y3Y4	419 aa		4.16	□□□□□ -1.74
KDM3B-208	ENST00000512928	TRAPPC1	Q9Y5R8	145 aa		4.16	□□□□□ -1.74
KDM3B-208	ENST00000512928		A0A087WYN8	130 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928		A4D1N5	150 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	IFITM10	A6NMD0	228 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	IFI27	P40305	119 aa	Predicted RBP	4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	FABP9	Q0Z7S8	132 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	ORMDL2	Q53FV1	153 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	C5orf38	Q86SI9	138 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	PRSS3P2	Q8NHM4	247 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	SPACA4	Q8TDM5	124 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	OPRPN	Q99935	248 aa	Predicted RBP	4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	SPANXA1	Q9NS26	97 aa		4.15	□□□□□ -1.75
KDM3B-208	ENST00000512928	IGLV4-69	A0A075B6H9	119 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928		A0A096LNI7	61 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	IGIP	A6NJ69	53 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	APOM	O95445	188 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	TRGC2	P03986	189 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	SYCN	Q0VAF6	134 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	COA6	Q5JTJ3	125 aa	Known RBP	4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	LINC00173	Q6ZV60	143 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	FAM19A3	Q7Z5A8	133 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	STPG4	Q8N801	248 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	C7orf33	Q8WU49	177 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	CAMK2N2	Q96S95	79 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	PKIG	Q9Y2B9	76 aa		4.14	□□□□□ -1.75
KDM3B-208	ENST00000512928	LINC01549	A6NIU2	74 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	SPAG11B	Q08648	103 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	GAGE2B	Q13066	116 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	CIRBP	Q14011	172 aa	Known RBP	4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	PDZD11	Q5EBL8	140 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928		Q6ZN92	141 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	ORAOV1	Q8WV07	137 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	TOMM6	Q96B49	74 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	AMELX	Q99217	191 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	TIMM17A	Q99595	171 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	CYSLTR1	Q9Y271	337 aa		4.13	□□□□□ -1.75
KDM3B-208	ENST00000512928	IGLV4-3	A0A075B6K6	122 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928		A0A0J9YXV3	536 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	LOC107984640	A0A0U1RRK4	108 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	HIST1H2BK	O60814	126 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	HIST1H2BJ	P06899	126 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	HIST1H2BO	P23527	126 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	HIST1H2BB	P33778	126 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	HIST1H2BD	P58876	126 aa		4.12	□□□□□ -1.75
KDM3B-208	ENST00000512928	KRTAP10-4	P60372	401 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms