RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 SNAPINO95295 136 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 RAB4AP20338 218 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 SSTP61278 116 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 HBBP68871 147 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 ZNF56Q15929 161 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 FAM104BQ5XKR9 115 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 CHCHD10Q8WYQ3 142 aaPredicted RBP5.65□□□□□ -1.5
NEDD9-213ENST00000512665 TMEM243Q9BU79 118 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 NIT2Q9NQR4 276 aa5.65□□□□□ -1.5
NEDD9-213ENST00000512665 A0A087X002 238 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 F5H697 171 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 APOC3P02656 99 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 FOXI1Q12951 378 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 MRAP2Q96G30 205 aa5.64□□□□□ -1.51
NEDD9-213ENST00000512665 TRBV24-1A0A075B6N3 115 aa5.63□□□□□ -1.51
NEDD9-213ENST00000512665 APOMO95445 188 aa5.63□□□□□ -1.51
NEDD9-213ENST00000512665 PPP1R17O96001 155 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 PPBPP02775 128 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 MGPP08493 103 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 CAMPP49913 170 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
NEDD9-213ENST00000512665 RPL32P62910 135 aaKnown RBP5.62□□□□□ -1.51
NEDD9-213ENST00000512665 MRPL51Q4U2R6 128 aaKnown RBP5.62□□□□□ -1.51
NEDD9-213ENST00000512665 MRPL54Q6P161 138 aaKnown RBP5.62□□□□□ -1.51
NEDD9-213ENST00000512665 AMN1Q8IY45 258 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 NRACQ8N912 160 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 RPS10P5Q9NQ39 176 aa5.62□□□□□ -1.51
NEDD9-213ENST00000512665 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-213ENST00000512665 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 S100PP25815 95 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 COX19Q49B96 90 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-213ENST00000512665 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 LINC00526Q96FQ7 95 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 YPEL4Q96NS1 127 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 GNB1LQ9BYB4 327 aa5.61□□□□□ -1.51
NEDD9-213ENST00000512665 TRBV27A0A0K0K1C4 114 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 ZNF861PO60384 105 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 NCR2O95944 276 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 TMEM136Q6ZRR5 245 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 C20orf78Q9BR46 151 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 LAMTOR2Q9Y2Q5 125 aa5.6□□□□□ -1.51
NEDD9-213ENST00000512665 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
NEDD9-213ENST00000512665 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
NEDD9-213ENST00000512665 TSHBP01222 138 aa5.59□□□□□ -1.51
NEDD9-213ENST00000512665 CKS2P33552 79 aa5.59□□□□□ -1.51
NEDD9-213ENST00000512665 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
NEDD9-213ENST00000512665 ST20Q9HBF5 79 aa5.59□□□□□ -1.51
NEDD9-213ENST00000512665 I3L3M4 83 aa5.58□□□□□ -1.52
NEDD9-213ENST00000512665 VCYO14598 125 aa5.58□□□□□ -1.52
NEDD9-213ENST00000512665 UBE2L6O14933 153 aa5.58□□□□□ -1.52
NEDD9-213ENST00000512665 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
NEDD9-213ENST00000512665 ORMDL3Q8N138 153 aa5.58□□□□□ -1.52
NEDD9-213ENST00000512665 SMCO4Q9NRQ5 59 aa5.58□□□□□ -1.52
NEDD9-213ENST00000512665 IGKV3OR2-268A0A0C4DH90 116 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 D6R8Y8 96 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 H7C423 109 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 TCAPO15273 167 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 TNFRSF6BO95407 300 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 ESDP10768 282 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 RPL18AQ02543 176 aaKnown RBP5.57□□□□□ -1.52
NEDD9-213ENST00000512665 COTL1Q14019 142 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
NEDD9-213ENST00000512665 PRELID3AQ96N28 172 aa5.56□□□□□ -1.52
NEDD9-213ENST00000512665 TGIF2-C20orf24A0A0A6YYL0 155 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 K7EMI3 77 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 NPYP01303 97 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 APCSP02743 223 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 PMCHP20382 165 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 XCL1P47992 114 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 KRTAP13-2Q52LG2 175 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 C2orf48Q96LS8 159 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
NEDD9-213ENST00000512665 FAM168BA1KXE4 195 aa5.54□□□□□ -1.52
NEDD9-213ENST00000512665 UBE2BP63146 152 aa5.54□□□□□ -1.52
NEDD9-213ENST00000512665 MRPL52Q86TS9 123 aaKnown RBP5.54□□□□□ -1.52
NEDD9-213ENST00000512665 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
NEDD9-213ENST00000512665 CAMK2N2Q96S95 79 aa5.54□□□□□ -1.52
NEDD9-213ENST00000512665 KIR2DL4Q99706 377 aa5.54□□□□□ -1.52
NEDD9-213ENST00000512665 ALKBH7Q9BT30 221 aaPredicted RBP5.54□□□□□ -1.52
NEDD9-213ENST00000512665 LINC01546A6NGU7 62 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 COLCA2A8K830 154 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 CCL25O15444 150 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 S100A1P23297 94 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 FAM229BQ4G0N7 80 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 CD164L2Q6UWJ8 174 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 CBLN2Q8IUK8 224 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 Q8N8P6 123 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 TIMM21Q9BVV7 248 aa5.53□□□□□ -1.52
NEDD9-213ENST00000512665 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
NEDD9-213ENST00000512665 MAP1LC3AQ9H492 121 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms