RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 DEFB112Q30KQ8 113 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 Q8N976 141 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 TNFRSF13BO14836 293 aaPredicted RBP6.24□□□□□ -1.41
HTT-208ENST00000510626 IGIPA6NJ69 53 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 Q8N7P7 452 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 HIGD2AQ9BW72 106 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 IGLV10-54A0A075B6I4 117 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 E7EUB6 86 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 LY6LH3BQJ8 138 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 A6NDX4 124 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 CELA1Q9UNI1 258 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
HTT-208ENST00000510626 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 Q8N814 137 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
HTT-208ENST00000510626 K7EQG2 157 aa6.23□□□□□ -1.41
HTT-208ENST00000510626 PLAC8L1A1L4L8 177 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 TSHBP01222 138 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 COL4A3Q01955 1670 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 NTM-AS1Q6ZSK4 140 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 MAP6D1Q9H9H5 199 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 DEFB114Q30KQ6 69 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 APRG1Q8IVJ8 170 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 LINC00310P59036 64 aa6.22□□□□□ -1.41
HTT-208ENST00000510626 KLK12Q9UKR0 248 aa6.21□□□□□ -1.41
HTT-208ENST00000510626 WIPF1O43516 503 aa6.21□□□□□ -1.42
HTT-208ENST00000510626 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
HTT-208ENST00000510626 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
HTT-208ENST00000510626 A0A096LPF7 62 aa6.21□□□□□ -1.42
HTT-208ENST00000510626 UNQ9165/PRO28630Q6UXU0 137 aa6.21□□□□□ -1.42
HTT-208ENST00000510626 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 RETNQ9HD89 108 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 PSMG3-AS1Q96PY0 264 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 EPG5Q9HCE0 2579 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 IGHV4-38-2P0DP08 117 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 SPRY2O43597 315 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 SMIM11BQ8TCY0 68 aa6.2□□□□□ -1.42
HTT-208ENST00000510626 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
HTT-208ENST00000510626 HCG22E2RYF7 251 aa6.19□□□□□ -1.42
HTT-208ENST00000510626 WFDC11Q8NEX6 87 aa6.19□□□□□ -1.42
HTT-208ENST00000510626 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
HTT-208ENST00000510626 ZFP36P26651 326 aaKnown RBP6.19□□□□□ -1.42
HTT-208ENST00000510626 SBSPONQ8IVN8 264 aa6.19□□□□□ -1.42
HTT-208ENST00000510626 LINC01548A6NM66 108 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
HTT-208ENST00000510626 Q6ZPA2 131 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 AMELXQ99217 191 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 A0A1B0GUV1 79 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 PRB1P04280 392 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 TMEM254Q8TBM7 123 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 IGLV4-69A0A075B6H9 119 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 DEFB113Q30KQ7 82 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 SMAD5-AS1Q9Y6J3 95 aa6.18□□□□□ -1.42
HTT-208ENST00000510626 AKAP13Q12802 2813 aa6.17□□□□□ -1.42
HTT-208ENST00000510626 WFDC10AQ9H1F0 79 aa6.17□□□□□ -1.42
HTT-208ENST00000510626 WFDC10BQ8IUB3 73 aa6.17□□□□□ -1.42
HTT-208ENST00000510626 DEFB136Q30KP8 78 aa6.17□□□□□ -1.42
HTT-208ENST00000510626 LELP1Q5T871 98 aa6.17□□□□□ -1.42
HTT-208ENST00000510626 Q6ZQY7 126 aa6.17□□□□□ -1.42
HTT-208ENST00000510626 PCSK5Q92824 1860 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 SYCNQ0VAF6 134 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 CRYGDP07320 174 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 SPRNQ5BIV9 151 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 IGHV4-61A0A0C4DH41 118 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 CEMP1Q6PRD7 247 aaPredicted RBP6.16□□□□□ -1.42
HTT-208ENST00000510626 Q6ZTI0 123 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 C1orf158Q8N1D5 194 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 MUC22E2RYF6 1773 aaPredicted RBP6.16□□□□□ -1.42
HTT-208ENST00000510626 Q8N6K4 173 aa6.16□□□□□ -1.42
HTT-208ENST00000510626 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.42
HTT-208ENST00000510626 CDC42SE2Q9NRR3 84 aa6.15□□□□□ -1.43
HTT-208ENST00000510626 SLPIP03973 132 aa6.15□□□□□ -1.43
HTT-208ENST00000510626 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.43
HTT-208ENST00000510626 Q8N3U1 123 aa6.14□□□□□ -1.43
HTT-208ENST00000510626 IGHV4-30-2A0A087WSY4 118 aa6.14□□□□□ -1.43
HTT-208ENST00000510626 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
HTT-208ENST00000510626 EGFEM1PQ0D2K5 195 aa6.14□□□□□ -1.43
HTT-208ENST00000510626 HILS1P60008 231 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 BPTFQ12830 3046 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 CD164Q04900 197 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 MAST4O15021 2626 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 DEFB135Q30KP9 77 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 Q6YL49 198 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 LMO4P61968 165 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 PRB2P02812 416 aaPredicted RBP6.13□□□□□ -1.43
HTT-208ENST00000510626 Q6ZS46 218 aa6.13□□□□□ -1.43
HTT-208ENST00000510626 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
HTT-208ENST00000510626 LINC00242Q5T6M2 205 aa6.12□□□□□ -1.43
HTT-208ENST00000510626 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
HTT-208ENST00000510626 DCANP1Q8TF63 244 aa6.11□□□□□ -1.43
HTT-208ENST00000510626 IGLV2-18A0A075B6J9 118 aa6.11□□□□□ -1.43
HTT-208ENST00000510626 C10orf25Q5T742 122 aa6.11□□□□□ -1.43
HTT-208ENST00000510626 SCXQ7RTU7 201 aa6.11□□□□□ -1.43
HTT-208ENST00000510626 PRO0461Q9UI25 63 aa6.11□□□□□ -1.43
HTT-208ENST00000510626 BEAN1Q3B7T3 259 aa6.11□□□□□ -1.43
HTT-208ENST00000510626 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms