RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 RPL39P62891 51 aaKnown RBP6.33□□□□□ -1.4
SCARB2-204ENST00000509994 HBBP68871 147 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 SPINK6Q6UWN8 80 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 ORAOV1Q8WV07 137 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 C20orf78Q9BR46 151 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
SCARB2-204ENST00000509994 A0A0J9YXV3 536 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 LINC00862A6NCI5 91 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 IFITM10A6NMD0 228 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 TNFRSF6BO95407 300 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 RAB5AP20339 215 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 LINC01600Q96MT4 127 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
SCARB2-204ENST00000509994 SMIM2Q9BVW6 85 aa6.32□□□□□ -1.4
SCARB2-204ENST00000509994 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
SCARB2-204ENST00000509994 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
SCARB2-204ENST00000509994 C2orf48Q96LS8 159 aa6.31□□□□□ -1.4
SCARB2-204ENST00000509994 TIMM21Q9BVV7 248 aa6.31□□□□□ -1.4
SCARB2-204ENST00000509994 SPANXA1Q9NS26 97 aa6.31□□□□□ -1.4
SCARB2-204ENST00000509994 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
SCARB2-204ENST00000509994 TGIF2-C20orf24A0A0A6YYL0 155 aa6.3□□□□□ -1.4
SCARB2-204ENST00000509994 C9JQL5 133 aa6.3□□□□□ -1.4
SCARB2-204ENST00000509994 NDUFA1O15239 70 aa6.3□□□□□ -1.4
SCARB2-204ENST00000509994 NPYP01303 97 aa6.3□□□□□ -1.4
SCARB2-204ENST00000509994 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
SCARB2-204ENST00000509994 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-204ENST00000509994 TRBV24-1A0A075B6N3 115 aa6.29□□□□□ -1.4
SCARB2-204ENST00000509994 A0A1B0GVG6 124 aa6.29□□□□□ -1.4
SCARB2-204ENST00000509994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-204ENST00000509994 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-204ENST00000509994 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
SCARB2-204ENST00000509994 ORMDL3Q8N138 153 aa6.29□□□□□ -1.4
SCARB2-204ENST00000509994 A0A1W2PNN7 141 aa6.28□□□□□ -1.4
SCARB2-204ENST00000509994 PPBPP02775 128 aa6.28□□□□□ -1.4
SCARB2-204ENST00000509994 RPL32P62910 135 aaKnown RBP6.28□□□□□ -1.4
SCARB2-204ENST00000509994 PHF5AQ7RTV0 110 aaKnown RBP6.28□□□□□ -1.4
SCARB2-204ENST00000509994 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-204ENST00000509994 PRELID3AQ96N28 172 aa6.28□□□□□ -1.4
SCARB2-204ENST00000509994 IMMP2LQ96T52 175 aa6.28□□□□□ -1.4
SCARB2-204ENST00000509994 SMDT1Q9H4I9 107 aa6.28□□□□□ -1.4
SCARB2-204ENST00000509994 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
SCARB2-204ENST00000509994 RNF151Q2KHN1 245 aa6.27□□□□□ -1.41
SCARB2-204ENST00000509994 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
SCARB2-204ENST00000509994 TMEM136Q6ZRR5 245 aa6.27□□□□□ -1.41
SCARB2-204ENST00000509994 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
SCARB2-204ENST00000509994 PSORS1C2Q9UIG4 136 aa6.27□□□□□ -1.41
SCARB2-204ENST00000509994 A0A087WZ39 114 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 A0A1B0GXF2 115 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
SCARB2-204ENST00000509994 Q6ZN92 141 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 ATP5L2Q7Z4Y8 100 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 CDIP1Q9H305 208 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 MAP1LC3AQ9H492 121 aa6.26□□□□□ -1.41
SCARB2-204ENST00000509994 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
SCARB2-204ENST00000509994 IGHV3OR16-9A0A0B4J2B5 98 aa6.25□□□□□ -1.41
SCARB2-204ENST00000509994 F8WDY8 70 aa6.25□□□□□ -1.41
SCARB2-204ENST00000509994 UBE2BP63146 152 aa6.25□□□□□ -1.41
SCARB2-204ENST00000509994 UNQ6190/PRO20217Q6UXQ8 127 aa6.25□□□□□ -1.41
SCARB2-204ENST00000509994 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
SCARB2-204ENST00000509994 PACRGQ96M98 296 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-204ENST00000509994 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
SCARB2-204ENST00000509994 PRSS2P07478 247 aa6.24□□□□□ -1.41
SCARB2-204ENST00000509994 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCARB2-204ENST00000509994 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
SCARB2-204ENST00000509994 TOMM7Q9P0U1 55 aa6.24□□□□□ -1.41
SCARB2-204ENST00000509994 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
SCARB2-204ENST00000509994 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 M0QXV9 152 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 MT-ND4LP03901 98 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 RAB14P61106 215 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 DIRC1Q969H9 104 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 CYSLTR1Q9Y271 337 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 TNXBP22105 4242 aa6.23□□□□□ -1.41
SCARB2-204ENST00000509994 CKS1BP61024 79 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 VCX2Q9H322 139 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 LAMTOR2Q9Y2Q5 125 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 PYGO1Q9Y3Y4 419 aa6.22□□□□□ -1.41
SCARB2-204ENST00000509994 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
SCARB2-204ENST00000509994 ORMDL2Q53FV1 153 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 C2orf66Q6UXQ4 117 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 Q8N8P6 123 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 CTDSP1Q9GZU7 261 aa6.21□□□□□ -1.42
SCARB2-204ENST00000509994 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
SCARB2-204ENST00000509994 ZC2HC1BQ5TFG8 222 aa6.2□□□□□ -1.42
SCARB2-204ENST00000509994 LRP2P98164 4655 aa6.19□□□□□ -1.42
SCARB2-204ENST00000509994 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
SCARB2-204ENST00000509994 UBE2D1P51668 147 aa6.19□□□□□ -1.42
SCARB2-204ENST00000509994 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
SCARB2-204ENST00000509994 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
SCARB2-204ENST00000509994 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
SCARB2-204ENST00000509994 ALKBH7Q9BT30 221 aaPredicted RBP6.19□□□□□ -1.42
SCARB2-204ENST00000509994 GEMIN7Q9H840 131 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms