RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ZNF90Q03938 601 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 PRR4Q16378 134 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 Q6Q795 121 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 C2orf91Q6ZV80 131 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 FAM19A2Q8N3H0 131 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 C16orf74Q96GX8 76 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 SMIM7Q9BQ49 75 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 SYS1-DBNDD2H3BUS1 97 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 XCL2Q9UBD3 114 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 KLF12Q9Y4X4 402 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 DYNC1H1Q14204 4646 aaKnown RBP3.36□□□□□ -1.87
NEK1-204ENST00000509912 GCHFRP30047 84 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 PMVKQ15126 192 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 CYP2G1PQ6ZSU1 146 aa3.36□□□□□ -1.87
NEK1-204ENST00000509912 TMEM262E9PQX1 116 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 ZNF324O75467 553 aaPredicted RBP3.35□□□□□ -1.87
NEK1-204ENST00000509912 GAS8-AS1O95177 125 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 FOXA3P55318 350 aaPredicted RBP3.35□□□□□ -1.87
NEK1-204ENST00000509912 TAS2R45P59539 299 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 DNAH2Q9P225 4427 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 P01737 135 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 RPL23P62829 140 aaKnown RBP3.35□□□□□ -1.87
NEK1-204ENST00000509912 Q1RN00 199 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 C9orf129Q5T035 196 aaKnown RBP3.35□□□□□ -1.87
NEK1-204ENST00000509912 BPIFA4PQ86YQ2 179 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 C3orf22Q8N5N4 141 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 KCNS1Q96KK3 526 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
NEK1-204ENST00000509912 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 RBMY1FQ15415 496 aaKnown RBP3.34□□□□□ -1.87
NEK1-204ENST00000509912 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 EBLN2Q6P2I7 272 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 PATE2Q6UY27 113 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 IGLL5B9A064 214 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 COX7A2P2O60397 106 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 PYYP10082 97 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 UBE2G1P62253 170 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 C12orf74Q32Q52 190 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 NKAPP1Q8N9T2 125 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 HIST1H4GQ99525 98 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 SLC25A2Q9BXI2 301 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 TMEM191AQ9H0A3 160 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 SPANXCQ9NY87 97 aa3.34□□□□□ -1.87
NEK1-204ENST00000509912 TRBV20OR9-2A0A075B6H5 130 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 M0R2P5 195 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 ZNF688P0C7X2 276 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 SMIM13P0DJ93 91 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 C10orf113Q5VZT2 155 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 Q6ZTC4 211 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 FAM167A-AS1Q96KT0 104 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 HHLA3Q9XRX5 114 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 KLLNB2CW77 178 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 LINC00305Q7Z4B0 112 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 TMEM263Q8WUH6 116 aaKnown RBP3.33□□□□□ -1.88
NEK1-204ENST00000509912 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 A8MWL6 223 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 UQCRQO14949 82 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 INSP01308 110 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 LYZP61626 148 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 UBE2L3P68036 154 aaKnown RBP3.33□□□□□ -1.88
NEK1-204ENST00000509912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 TSKUQ8WUA8 353 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 PPDPFLQ8WWR9 84 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 PMCHL2Q9BQD1 86 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
NEK1-204ENST00000509912 IGHV3OR16-8A0A075B7F1 116 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 PLAC8L1A1L4L8 177 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 DEFB4AO15263 64 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 HLA-DMBP28068 263 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 DEFB131AP59861 70 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 PAXXQ9BUH6 204 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 IGKV3-7A0A075B6H7 116 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 K7ERJ3 54 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 SPINK4O60575 86 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 PRB4P10163 310 aaPredicted RBP3.32□□□□□ -1.88
NEK1-204ENST00000509912 COX8AP10176 69 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 TXNDC17Q9BRA2 123 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
NEK1-204ENST00000509912 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 TRAV8-2A0A0B4J237 113 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 DPM2O94777 84 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 C1orf158Q8N1D5 194 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 FXYD5Q96DB9 178 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 KMT2AQ03164 3969 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 DNAH11Q96DT5 4516 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 TRAV13-1A0A0B4J241 112 aa3.31□□□□□ -1.88
NEK1-204ENST00000509912 CRXO43186 299 aaPredicted RBP3.31□□□□□ -1.88
NEK1-204ENST00000509912 CENPWQ5EE01 88 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms