RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 OXTP01178 125 aa11.83□□□□□ -0.52
UBE3D-207ENST00000509102 STPG4Q8N801 248 aa11.83□□□□□ -0.52
UBE3D-207ENST00000509102 CAMK2N2Q96S95 79 aa11.83□□□□□ -0.52
UBE3D-207ENST00000509102 IMMP2LQ96T52 175 aa11.83□□□□□ -0.52
UBE3D-207ENST00000509102 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
UBE3D-207ENST00000509102 A0A096LNI7 61 aa11.82□□□□□ -0.52
UBE3D-207ENST00000509102 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
UBE3D-207ENST00000509102 OR10D4PQ8NGN7 298 aa11.81□□□□□ -0.52
UBE3D-207ENST00000509102 C2orf48Q96LS8 159 aa11.81□□□□□ -0.52
UBE3D-207ENST00000509102 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
UBE3D-207ENST00000509102 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
UBE3D-207ENST00000509102 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
UBE3D-207ENST00000509102 OPRPNQ99935 248 aaPredicted RBP11.8□□□□□ -0.52
UBE3D-207ENST00000509102 PYGO1Q9Y3Y4 419 aa11.8□□□□□ -0.52
UBE3D-207ENST00000509102 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
UBE3D-207ENST00000509102 K7EMI3 77 aa11.79□□□□□ -0.52
UBE3D-207ENST00000509102 ORMDL2Q53FV1 153 aa11.79□□□□□ -0.52
UBE3D-207ENST00000509102 Q6ZN92 141 aa11.79□□□□□ -0.52
UBE3D-207ENST00000509102 Q8N8P6 123 aa11.79□□□□□ -0.52
UBE3D-207ENST00000509102 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
UBE3D-207ENST00000509102 S100PP25815 95 aa11.78□□□□□ -0.52
UBE3D-207ENST00000509102 TEX43Q6ZNM6 134 aa11.78□□□□□ -0.52
UBE3D-207ENST00000509102 Q6ZRU5 148 aa11.78□□□□□ -0.52
UBE3D-207ENST00000509102 TMEM141Q96I45 108 aa11.78□□□□□ -0.52
UBE3D-207ENST00000509102 C2orf88Q9BSF0 95 aa11.78□□□□□ -0.52
UBE3D-207ENST00000509102 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
UBE3D-207ENST00000509102 TRAV9-1A0A075B6T8 112 aa11.77□□□□□ -0.53
UBE3D-207ENST00000509102 F8WDY8 70 aa11.77□□□□□ -0.53
UBE3D-207ENST00000509102 G0S2P27469 103 aa11.77□□□□□ -0.53
UBE3D-207ENST00000509102 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.53
UBE3D-207ENST00000509102 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
UBE3D-207ENST00000509102 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
UBE3D-207ENST00000509102 IGHV3OR16-9A0A0B4J2B5 98 aa11.76□□□□□ -0.53
UBE3D-207ENST00000509102 ADCYAP1P18509 176 aa11.76□□□□□ -0.53
UBE3D-207ENST00000509102 PTTG1IPP53801 180 aa11.76□□□□□ -0.53
UBE3D-207ENST00000509102 IFITM2Q01629 132 aa11.76□□□□□ -0.53
UBE3D-207ENST00000509102 GAGE2BQ13066 116 aa11.76□□□□□ -0.53
UBE3D-207ENST00000509102 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
UBE3D-207ENST00000509102 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
UBE3D-207ENST00000509102 NDUFA1O15239 70 aa11.74□□□□□ -0.53
UBE3D-207ENST00000509102 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
UBE3D-207ENST00000509102 RPL18AQ02543 176 aaKnown RBP11.74□□□□□ -0.53
UBE3D-207ENST00000509102 RNF151Q2KHN1 245 aa11.74□□□□□ -0.53
UBE3D-207ENST00000509102 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
UBE3D-207ENST00000509102 NPSP0C0P6 89 aa11.73□□□□□ -0.53
UBE3D-207ENST00000509102 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
UBE3D-207ENST00000509102 VCX2Q9H322 139 aa11.73□□□□□ -0.53
UBE3D-207ENST00000509102 A0A087WZ39 114 aa11.71□□□□□ -0.53
UBE3D-207ENST00000509102 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
UBE3D-207ENST00000509102 MRPL35Q9NZE8 188 aaKnown RBP11.71□□□□□ -0.53
UBE3D-207ENST00000509102 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.7□□□□□ -0.54
UBE3D-207ENST00000509102 LORP23490 312 aaPredicted RBP11.7□□□□□ -0.54
UBE3D-207ENST00000509102 COX19Q49B96 90 aa11.7□□□□□ -0.54
UBE3D-207ENST00000509102 UBE2D1P51668 147 aa11.69□□□□□ -0.54
UBE3D-207ENST00000509102 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
UBE3D-207ENST00000509102 KIAA1644Q3SXP7 199 aa11.69□□□□□ -0.54
UBE3D-207ENST00000509102 GNB1LQ9BYB4 327 aa11.69□□□□□ -0.54
UBE3D-207ENST00000509102 SEC11AP67812 179 aa11.68□□□□□ -0.54
UBE3D-207ENST00000509102 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
UBE3D-207ENST00000509102 A0A0J9YXV3 536 aa11.67□□□□□ -0.54
UBE3D-207ENST00000509102 MT-ND6P03923 174 aa11.67□□□□□ -0.54
UBE3D-207ENST00000509102 RHEBQ15382 184 aa11.67□□□□□ -0.54
UBE3D-207ENST00000509102 Q6ZRP5 223 aa11.67□□□□□ -0.54
UBE3D-207ENST00000509102 LINC01561Q8N1V8 128 aa11.67□□□□□ -0.54
UBE3D-207ENST00000509102 AMELXQ99217 191 aa11.67□□□□□ -0.54
UBE3D-207ENST00000509102 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
UBE3D-207ENST00000509102 LINC01549A6NIU2 74 aa11.66□□□□□ -0.54
UBE3D-207ENST00000509102 IGIPA6NJ69 53 aa11.66□□□□□ -0.54
UBE3D-207ENST00000509102 PRSS2P07478 247 aa11.66□□□□□ -0.54
UBE3D-207ENST00000509102 TIMM17AQ99595 171 aa11.66□□□□□ -0.54
UBE3D-207ENST00000509102 RPS10P5Q9NQ39 176 aa11.66□□□□□ -0.54
UBE3D-207ENST00000509102 C9orf116Q5BN46 136 aaPredicted RBP11.65□□□□□ -0.54
UBE3D-207ENST00000509102 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
UBE3D-207ENST00000509102 PACRGQ96M98 296 aaPredicted RBP11.65□□□□□ -0.54
UBE3D-207ENST00000509102 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.54
UBE3D-207ENST00000509102 HERVK_113P63121 156 aa11.64□□□□□ -0.55
UBE3D-207ENST00000509102 UNQ6190/PRO20217Q6UXQ8 127 aa11.64□□□□□ -0.55
UBE3D-207ENST00000509102 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
UBE3D-207ENST00000509102 TRBV30A0A0K0K1B3 111 aa11.63□□□□□ -0.55
UBE3D-207ENST00000509102 TLX1NBP0CAT3 122 aa11.63□□□□□ -0.55
UBE3D-207ENST00000509102 ZC2HC1BQ5TFG8 222 aa11.63□□□□□ -0.55
UBE3D-207ENST00000509102 LINC00173Q6ZV60 143 aa11.63□□□□□ -0.55
UBE3D-207ENST00000509102 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
UBE3D-207ENST00000509102 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
UBE3D-207ENST00000509102 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
UBE3D-207ENST00000509102 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 CKS1BP61024 79 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 FABP9Q0Z7S8 132 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 C10orf25Q5T742 122 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 ERASQ7Z444 233 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 ALKBH7Q9BT30 221 aaPredicted RBP11.62□□□□□ -0.55
UBE3D-207ENST00000509102 SMCO4Q9NRQ5 59 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
UBE3D-207ENST00000509102 KIAA0087Q14695 138 aa11.61□□□□□ -0.55
UBE3D-207ENST00000509102 NDUFA5Q16718 116 aa11.61□□□□□ -0.55
UBE3D-207ENST00000509102 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
UBE3D-207ENST00000509102 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
UBE3D-207ENST00000509102 FAM19A3Q7Z5A8 133 aa11.61□□□□□ -0.55
UBE3D-207ENST00000509102 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms