RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 PCP4P48539 62 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 UQCC3Q6UW78 93 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 ZNF664Q8N3J9 261 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 NRACQ8N912 160 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 CDC42SE2Q9NRR3 84 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 LAMTOR2Q9Y2Q5 125 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 IGKV3OR2-268A0A0C4DH90 116 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 RPL37AP61513 92 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 SPACA4Q8TDM5 124 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 IMMP2LQ96T52 175 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 TMEM242Q9NWH2 141 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 PLAC8Q9NZF1 115 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 LINC00474Q9P2X8 69 aa5.05□□□□□ -1.6
UBE2D3-222ENST00000508238 A0A087WYN8 130 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 K7EMI3 77 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 APOMO95445 188 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 MRPL51Q4U2R6 128 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 CLLU1Q5K131 121 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 TMEM136Q6ZRR5 245 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 ORMDL3Q8N138 153 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 TIMM21Q9BVV7 248 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 CTDSP1Q9GZU7 261 aa5.04□□□□□ -1.6
UBE2D3-222ENST00000508238 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
UBE2D3-222ENST00000508238 SMKR1H3BMG3 65 aa5.03□□□□□ -1.6
UBE2D3-222ENST00000508238 CHTF8P0CG12 524 aa5.03□□□□□ -1.6
UBE2D3-222ENST00000508238 XCL1P47992 114 aa5.03□□□□□ -1.6
UBE2D3-222ENST00000508238 COX6A2Q02221 97 aa5.03□□□□□ -1.6
UBE2D3-222ENST00000508238 HIGD2BQ4VC39 106 aa5.03□□□□□ -1.6
UBE2D3-222ENST00000508238 A0A1B0GXF2 115 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 LINC01549A6NIU2 74 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 F8WDY8 70 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 S100PP25815 95 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 HNRNPA3P51991 378 aaKnown RBP5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 COX19Q49B96 90 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 MRPL54Q6P161 138 aaKnown RBP5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 PRSS3P2Q8NHM4 247 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 SPANXA1Q9NS26 97 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 UBE2D4Q9Y2X8 147 aa5.02□□□□□ -1.61
UBE2D3-222ENST00000508238 TRAV9-1A0A075B6T8 112 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 PRSS47A8MTI9 375 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 D6R8Y8 96 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 COX7A2LO14548 114 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 IFI27P40305 119 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 SERTAD4-AS1Q5TG53 156 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 Q6ZRU5 148 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 PRELID3AQ96N28 172 aa5.01□□□□□ -1.61
UBE2D3-222ENST00000508238 MRPS36P82909 103 aaKnown RBP5□□□□□ -1.61
UBE2D3-222ENST00000508238 SYCNQ0VAF6 134 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 ORMDL2Q53FV1 153 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 FAM104AQ969W3 186 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 SMIM2Q9BVW6 85 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 SEC11CQ9BY50 192 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 MAP1LC3AQ9H492 121 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 NXT2Q9NPJ8 142 aaKnown RBP5□□□□□ -1.61
UBE2D3-222ENST00000508238 PYGO1Q9Y3Y4 419 aa5□□□□□ -1.61
UBE2D3-222ENST00000508238 PKHD1L1Q86WI1 4243 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 A0A096LNI7 61 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 TMEM218A2RU14 115 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 SEC11AP67812 179 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 MAJINQ3KP22 176 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 Q6ZN92 141 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 C7orf33Q8WU49 177 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 CARD19Q96LW7 228 aa4.99□□□□□ -1.61
UBE2D3-222ENST00000508238 TRAV13-1A0A0B4J241 112 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 IGKV2-24A0A0C4DH68 120 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 NPYP01303 97 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 Q6ZUT4 128 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 STPG4Q8N801 248 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 LINC00526Q96FQ7 95 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 C2orf48Q96LS8 159 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 C2orf88Q9BSF0 95 aa4.98□□□□□ -1.61
UBE2D3-222ENST00000508238 IGLV4-69A0A075B6H9 119 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 TGIF2-C20orf24A0A0A6YYL0 155 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 IGHV3OR16-9A0A0B4J2B5 98 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 RPL39P62891 51 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 NDUFA5Q16718 116 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 RNASE13Q5GAN3 156 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 TEX43Q6ZNM6 134 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 Q8N8P6 123 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 OR10D4PQ8NGN7 298 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 VCX2Q9H322 139 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 CYSLTR1Q9Y271 337 aa4.97□□□□□ -1.61
UBE2D3-222ENST00000508238 LOC107984640A0A0U1RRK4 108 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 LOC389332A0A1B0GUA5 103 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 MT-ND6P03923 174 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 PRR3P79522 188 aaKnown RBP4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 C5orf38Q86SI9 138 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 TMEM141Q96I45 108 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 CAMK2N2Q96S95 79 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 GNB1LQ9BYB4 327 aa4.96□□□□□ -1.62
UBE2D3-222ENST00000508238 IFITM10A6NMD0 228 aa4.95□□□□□ -1.62
UBE2D3-222ENST00000508238 RHEBQ15382 184 aa4.95□□□□□ -1.62
UBE2D3-222ENST00000508238 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
UBE2D3-222ENST00000508238 OPRPNQ99935 248 aaPredicted RBP4.95□□□□□ -1.62
UBE2D3-222ENST00000508238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms