RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 ATP5L2Q7Z4Y8 100 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 IGLV4-69A0A075B6H9 119 aa5.34□□□□□ -1.55
HMGXB4-207ENST00000498212 RAB14P61106 215 aa5.34□□□□□ -1.55
HMGXB4-207ENST00000498212 PNRC1Q12796 327 aaPredicted RBP5.34□□□□□ -1.55
HMGXB4-207ENST00000498212 Q6ZRU5 148 aa5.34□□□□□ -1.55
HMGXB4-207ENST00000498212 ORMDL3Q8N138 153 aa5.34□□□□□ -1.55
HMGXB4-207ENST00000498212 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
HMGXB4-207ENST00000498212 APOMO95445 188 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 SERTAD4-AS1Q5TG53 156 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 TMEM136Q6ZRR5 245 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 C5orf38Q86SI9 138 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 ANAPC16Q96DE5 110 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 PRELID3AQ96N28 172 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 CAMK2N2Q96S95 79 aa5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 MRPL18Q9H0U6 180 aaKnown RBP5.33□□□□□ -1.56
HMGXB4-207ENST00000498212 LOC107984640A0A0U1RRK4 108 aa5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 MT-ND4LP03901 98 aa5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 RAB5AP20339 215 aa5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 MRPS36P82909 103 aaKnown RBP5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 C2orf48Q96LS8 159 aa5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 OPRPNQ99935 248 aaPredicted RBP5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 LRP1Q07954 4544 aaKnown RBP5.32□□□□□ -1.56
HMGXB4-207ENST00000498212 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 PRSS47A8MTI9 375 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 IFI27P40305 119 aaPredicted RBP5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 PTTG1IPP53801 180 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 PRR3P79522 188 aaKnown RBP5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 SPAG11BQ08648 103 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 OR10D4PQ8NGN7 298 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 LAMTOR2Q9Y2Q5 125 aa5.31□□□□□ -1.56
HMGXB4-207ENST00000498212 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
HMGXB4-207ENST00000498212 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
HMGXB4-207ENST00000498212 LOC389332A0A1B0GUA5 103 aa5.3□□□□□ -1.56
HMGXB4-207ENST00000498212 ORAOV1Q8WV07 137 aa5.3□□□□□ -1.56
HMGXB4-207ENST00000498212 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
HMGXB4-207ENST00000498212 TGIF2-C20orf24A0A0A6YYL0 155 aa5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 CLLU1Q5K131 121 aa5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 TMEM141Q96I45 108 aa5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 PYGO1Q9Y3Y4 419 aa5.29□□□□□ -1.56
HMGXB4-207ENST00000498212 IGLV4-3A0A075B6K6 122 aa5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 F8WDY8 70 aa5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 TEX43Q6ZNM6 134 aa5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 Q6ZRP5 223 aa5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 Q8N8P6 123 aa5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 MRPL35Q9NZE8 188 aaKnown RBP5.28□□□□□ -1.56
HMGXB4-207ENST00000498212 A0A087WZ39 114 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 A0A0J9YXV3 536 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 NDUFA1O15239 70 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 ORMDL2Q53FV1 153 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 C9orf116Q5BN46 136 aaPredicted RBP5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 LINC00242Q5T6M2 205 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 UQCC3Q6UW78 93 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 C2orf66Q6UXQ4 117 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 Q6ZN92 141 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 IMMP2LQ96T52 175 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 C2orf88Q9BSF0 95 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 CTDSP1Q9GZU7 261 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 PLA2G2DQ9UNK4 145 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 CYSLTR1Q9Y271 337 aa5.27□□□□□ -1.57
HMGXB4-207ENST00000498212 A0A1W2PNN7 141 aa5.26□□□□□ -1.57
HMGXB4-207ENST00000498212 K7EMI3 77 aa5.26□□□□□ -1.57
HMGXB4-207ENST00000498212 ADCYAP1P18509 176 aa5.26□□□□□ -1.57
HMGXB4-207ENST00000498212 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
HMGXB4-207ENST00000498212 NXT2Q9NPJ8 142 aaKnown RBP5.26□□□□□ -1.57
HMGXB4-207ENST00000498212 TMEM218A2RU14 115 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 NPSP0C0P6 89 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 UBE2D1P51668 147 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 IFITM2Q01629 132 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 UNQ6190/PRO20217Q6UXQ8 127 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 LINC01600Q96MT4 127 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 AMELXQ99217 191 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 VCX2Q9H322 139 aa5.25□□□□□ -1.57
HMGXB4-207ENST00000498212 TRAV9-1A0A075B6T8 112 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 G0S2P27469 103 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 KIAA1644Q3SXP7 199 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 ZC2HC1BQ5TFG8 222 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 LINC01561Q8N1V8 128 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 C6orf48Q9UBA6 75 aa5.24□□□□□ -1.57
HMGXB4-207ENST00000498212 TRBV30A0A0K0K1B3 111 aa5.23□□□□□ -1.57
HMGXB4-207ENST00000498212 IGIPA6NJ69 53 aa5.23□□□□□ -1.57
HMGXB4-207ENST00000498212 EIF4EBP3O60516 100 aaPredicted RBP5.23□□□□□ -1.57
HMGXB4-207ENST00000498212 MT-ND6P03923 174 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms