RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CYYR1Q96J86 154 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 CST11Q9H112 138 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 NAA60Q9H7X0 242 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 TAS2R8Q9NYW2 309 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 SERP1Q9Y6X1 66 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 TNXBP22105 4242 aa2.07□□□□□ -2.08
EXOSC3-208ENST00000496910 TRAV40A0A0B4J280 105 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 IBA57-AS1B1ANH7 110 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 ZNF736B4DX44 427 aaPredicted RBP2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 PMP2P02689 132 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 SPINK8P0C7L1 97 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 BRS3P32247 399 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 MOBPQ13875 183 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 Q56UQ5 140 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 COL5A1-AS1Q5SY13 56 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 Q5VSD8 79 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 FP248Q71RG6 208 aaPredicted RBP2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 HMGN2P46Q86SG4 172 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 LINC00269Q8N2A0 174 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 Q8N9L7 120 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 OR8B3Q8NGG8 313 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 RAB37Q96AX2 223 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 SLC50A1Q9BRV3 221 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 HIGD2AQ9BW72 106 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 FAIMQ9NVQ4 179 aa2.06□□□□□ -2.08
EXOSC3-208ENST00000496910 TMSB15BA0A087X1C1 80 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 IGKV3D-11A0A0A0MRZ8 115 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 LOC107984156A0A0G2JMH3 177 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 HMSDA8MTL9 139 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 OOSP1A8MZH6 123 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 MCRIP1C9JLW8 97 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 PSCAO43653 123 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 HYPMO75409 117 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 P0C880 135 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 ASB16-AS1Q495Z4 193 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 C9orf153Q5TBE3 101 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 ARL17AQ8IVW1 177 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 C9orf163Q8N9P6 203 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 LINC00526Q96FQ7 95 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 C14orf132Q9NPU4 83 aa2.05□□□□□ -2.08
EXOSC3-208ENST00000496910 IGHV1-24A0A0C4DH33 117 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 MUC21A0A0G2JKD1 596 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 MUC21A0A140T8X8 626 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 PNMA8CA0A1B0GUJ8 204 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 YPEL1O60688 119 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 ASAH2BP0C7U1 165 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 IFITM1P13164 125 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 MIFP14174 115 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 ETV6P41212 452 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 SSR2P43308 183 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 ZNF846Q147U1 533 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 FOXI2Q6ZQN5 318 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 C4orf33Q8N1A6 199 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 C9orf62Q8N4C0 152 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 TTC9CQ8N5M4 171 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 LHFPL6Q9Y693 200 aa2.04□□□□□ -2.08
EXOSC3-208ENST00000496910 ZNF705FA8MVS1 300 aaPredicted RBP2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 E7EQL1 145 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 G3V3Q6 166 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 APOC4-APOC2K7ER74 178 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 APOC2P02655 101 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 BAALC-AS2P0C853 105 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 DSCR4P56555 118 aaPredicted RBP2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 SPANXN5Q5MJ07 72 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 Q6AWC8 147 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 ATP6V0E2Q8NHE4 81 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 C10orf105Q8TEF2 133 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 COPS9Q8WXC6 57 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 Q96M85 177 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 Q9BRP9 147 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 NOP16Q9Y3C1 178 aaKnown RBP2.03□□□□□ -2.08
EXOSC3-208ENST00000496910 IGLV10-54A0A075B6I4 117 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 A0A087WSZ3 146 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 C3orf85A0A1B0GTC6 90 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 E7EUB6 86 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 UBL3O95164 117 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 ARPINQ7Z6K5 226 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 SVBPQ8N300 66 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 VSTM2AQ8TAG5 236 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 MUCL1Q96DR8 90 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 DSCR8Q96T75 97 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 PSORS1C2Q9UIG4 136 aa2.02□□□□□ -2.09
EXOSC3-208ENST00000496910 IGKV2D-24A0A075B6R9 120 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 A0A1W2PRS3 328 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 J3QLW9 94 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 EDF1O60869 148 aaKnown RBP2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 PROSCO94903 275 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 HINT1P49773 126 aaPredicted RBP2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 ERHP84090 104 aaKnown RBP2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 DEFB134Q4QY38 66 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 PYDC2Q56P42 97 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 OR2T2Q6IF00 324 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms