RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TCAPO15273 167 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 SMAGPQ0VAQ4 97 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 GAGE2BQ13066 116 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 Q6ZRU5 148 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 Q6ZUT4 128 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 TMEM18Q96B42 140 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
MSH5-218ENST00000494646 C20orf78Q9BR46 151 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 CSDC2Q9Y534 153 aaKnown RBP6.02□□□□□ -1.45
MSH5-218ENST00000494646 F8W036 122 aa6.01□□□□□ -1.45
MSH5-218ENST00000494646 NPYP01303 97 aa6.01□□□□□ -1.45
MSH5-218ENST00000494646 HBBP68871 147 aa6.01□□□□□ -1.45
MSH5-218ENST00000494646 A0A0J9YXV3 536 aa6□□□□□ -1.45
MSH5-218ENST00000494646 A0A1B0GXF2 115 aa6□□□□□ -1.45
MSH5-218ENST00000494646 MT1HL1P0DM35 61 aa6□□□□□ -1.45
MSH5-218ENST00000494646 TMEM136Q6ZRR5 245 aa6□□□□□ -1.45
MSH5-218ENST00000494646 FAM104AQ969W3 186 aa6□□□□□ -1.45
MSH5-218ENST00000494646 CAMK2N2Q96S95 79 aa6□□□□□ -1.45
MSH5-218ENST00000494646 SMIM2Q9BVW6 85 aa6□□□□□ -1.45
MSH5-218ENST00000494646 LOC389332A0A1B0GUA5 103 aa5.99□□□□□ -1.45
MSH5-218ENST00000494646 A0A1W2PNN7 141 aa5.99□□□□□ -1.45
MSH5-218ENST00000494646 S100A8P05109 93 aa5.99□□□□□ -1.45
MSH5-218ENST00000494646 RPL32P62910 135 aaKnown RBP5.99□□□□□ -1.45
MSH5-218ENST00000494646 TIMM21Q9BVV7 248 aa5.99□□□□□ -1.45
MSH5-218ENST00000494646 LINC00474Q9P2X8 69 aa5.99□□□□□ -1.45
MSH5-218ENST00000494646 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
MSH5-218ENST00000494646 APOMO95445 188 aa5.98□□□□□ -1.45
MSH5-218ENST00000494646 PRR3P79522 188 aaKnown RBP5.98□□□□□ -1.45
MSH5-218ENST00000494646 PRELID3AQ96N28 172 aa5.98□□□□□ -1.45
MSH5-218ENST00000494646 H0Y8G0 127 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 PPBPP02775 128 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 RAB5AP20339 215 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 SPAG11BQ08648 103 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 ORMDL3Q8N138 153 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 ORAOV1Q8WV07 137 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 C2orf48Q96LS8 159 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 LRP2P98164 4655 aa5.97□□□□□ -1.45
MSH5-218ENST00000494646 IFITM10A6NMD0 228 aa5.96□□□□□ -1.46
MSH5-218ENST00000494646 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.96□□□□□ -1.46
MSH5-218ENST00000494646 VPREB1P12018 145 aa5.96□□□□□ -1.46
MSH5-218ENST00000494646 RPL18AQ02543 176 aaKnown RBP5.96□□□□□ -1.46
MSH5-218ENST00000494646 LBHQ53QV2 105 aaPredicted RBP5.96□□□□□ -1.46
MSH5-218ENST00000494646 ATP5L2Q7Z4Y8 100 aa5.96□□□□□ -1.46
MSH5-218ENST00000494646 SPANXA1Q9NS26 97 aa5.96□□□□□ -1.46
MSH5-218ENST00000494646 IGHV3OR16-9A0A0B4J2B5 98 aa5.95□□□□□ -1.46
MSH5-218ENST00000494646 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
MSH5-218ENST00000494646 RAB14P61106 215 aa5.95□□□□□ -1.46
MSH5-218ENST00000494646 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
MSH5-218ENST00000494646 C9orf116Q5BN46 136 aaPredicted RBP5.95□□□□□ -1.46
MSH5-218ENST00000494646 C10orf25Q5T742 122 aa5.95□□□□□ -1.46
MSH5-218ENST00000494646 ZC2HC1BQ5TFG8 222 aa5.95□□□□□ -1.46
MSH5-218ENST00000494646 UNQ6190/PRO20217Q6UXQ8 127 aa5.95□□□□□ -1.46
MSH5-218ENST00000494646 Q6ZRP5 223 aa5.95□□□□□ -1.46
MSH5-218ENST00000494646 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
MSH5-218ENST00000494646 MT-ND4LP03901 98 aa5.94□□□□□ -1.46
MSH5-218ENST00000494646 SRSF9Q13242 221 aaKnown RBP eCLIP5.94□□□□□ -1.46
MSH5-218ENST00000494646 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
MSH5-218ENST00000494646 OR10D4PQ8NGN7 298 aa5.94□□□□□ -1.46
MSH5-218ENST00000494646 LINC01600Q96MT4 127 aa5.94□□□□□ -1.46
MSH5-218ENST00000494646 MAP1LC3AQ9H492 121 aa5.94□□□□□ -1.46
MSH5-218ENST00000494646 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
MSH5-218ENST00000494646 IGLV4-3A0A075B6K6 122 aa5.93□□□□□ -1.46
MSH5-218ENST00000494646 TRIAP1O43715 76 aa5.93□□□□□ -1.46
MSH5-218ENST00000494646 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
MSH5-218ENST00000494646 RNF151Q2KHN1 245 aa5.93□□□□□ -1.46
MSH5-218ENST00000494646 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
MSH5-218ENST00000494646 MRPL35Q9NZE8 188 aaKnown RBP5.93□□□□□ -1.46
MSH5-218ENST00000494646 TGIF2-C20orf24A0A0A6YYL0 155 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 FAM168BA1KXE4 195 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 NDUFA1O15239 70 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 GAGE2EQ4V326 116 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 Q8N8P6 123 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 TMEM141Q96I45 108 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 IMMP2LQ96T52 175 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 C6orf48Q9UBA6 75 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 GAGE2DQ9UEU5 116 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 PYGO1Q9Y3Y4 419 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 LPAP08519 4548 aa5.92□□□□□ -1.46
MSH5-218ENST00000494646 A0A087WZ39 114 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 MT-ND6P03923 174 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 KIAA0087Q14695 138 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 KIAA1644Q3SXP7 199 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 C1orf137Q5JT78 98 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 C2orf82Q6UX34 121 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 C2orf66Q6UXQ4 117 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 TEX43Q6ZNM6 134 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 VCX2Q9H322 139 aa5.91□□□□□ -1.46
MSH5-218ENST00000494646 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
MSH5-218ENST00000494646 UBE2D1P51668 147 aa5.9□□□□□ -1.46
MSH5-218ENST00000494646 CLLU1Q5K131 121 aa5.9□□□□□ -1.46
MSH5-218ENST00000494646 CYSLTR1Q9Y271 337 aa5.9□□□□□ -1.46
MSH5-218ENST00000494646 LAMTOR2Q9Y2Q5 125 aa5.9□□□□□ -1.46
MSH5-218ENST00000494646 ORMDL2Q53FV1 153 aa5.89□□□□□ -1.47
MSH5-218ENST00000494646 Q6ZN92 141 aa5.89□□□□□ -1.47
MSH5-218ENST00000494646 FAM19A5Q7Z5A7 132 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms