RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PYGO1Q9Y3Y4 419 aa17.09■□□□□ 0.33
SH3GL3-204ENST00000492099 LOC389332A0A1B0GUA5 103 aa17.08■□□□□ 0.32
SH3GL3-204ENST00000492099 IFITM10A6NMD0 228 aa17.08■□□□□ 0.32
SH3GL3-204ENST00000492099 LRP1Q07954 4544 aaKnown RBP17.08■□□□□ 0.32
SH3GL3-204ENST00000492099 IFITM2Q01629 132 aa17.07■□□□□ 0.32
SH3GL3-204ENST00000492099 Q6ZRU5 148 aa17.07■□□□□ 0.32
SH3GL3-204ENST00000492099 IGHV3OR16-9A0A0B4J2B5 98 aa17.06■□□□□ 0.32
SH3GL3-204ENST00000492099 TMEM218A2RU14 115 aa17.06■□□□□ 0.32
SH3GL3-204ENST00000492099 Q8N8P6 123 aa17.06■□□□□ 0.32
SH3GL3-204ENST00000492099 OR10D4PQ8NGN7 298 aa17.06■□□□□ 0.32
SH3GL3-204ENST00000492099 LOC107984640A0A0U1RRK4 108 aa17.05■□□□□ 0.32
SH3GL3-204ENST00000492099 SPAG11BQ08648 103 aa17.05■□□□□ 0.32
SH3GL3-204ENST00000492099 ADCYAP1P18509 176 aa17.04■□□□□ 0.32
SH3GL3-204ENST00000492099 CTDSP1Q9GZU7 261 aa17.04■□□□□ 0.32
SH3GL3-204ENST00000492099 PTTG1IPP53801 180 aa17.03■□□□□ 0.32
SH3GL3-204ENST00000492099 PKHD1L1Q86WI1 4243 aa17.02■□□□□ 0.32
SH3GL3-204ENST00000492099 IGLV4-3A0A075B6K6 122 aa17.02■□□□□ 0.32
SH3GL3-204ENST00000492099 K7EMI3 77 aa17.02■□□□□ 0.32
SH3GL3-204ENST00000492099 TMEM141Q96I45 108 aa17.02■□□□□ 0.32
SH3GL3-204ENST00000492099 FAT3Q8TDW7 4589 aa17.01■□□□□ 0.31
SH3GL3-204ENST00000492099 F8WDY8 70 aa17.01■□□□□ 0.31
SH3GL3-204ENST00000492099 GAGE2BQ13066 116 aa17.01■□□□□ 0.31
SH3GL3-204ENST00000492099 ORMDL2Q53FV1 153 aa17.01■□□□□ 0.31
SH3GL3-204ENST00000492099 ORAOV1Q8WV07 137 aa17.01■□□□□ 0.31
SH3GL3-204ENST00000492099 CYSLTR1Q9Y271 337 aa17.01■□□□□ 0.31
SH3GL3-204ENST00000492099 TGIF2-C20orf24A0A0A6YYL0 155 aa17■□□□□ 0.31
SH3GL3-204ENST00000492099 RNF151Q2KHN1 245 aa17■□□□□ 0.31
SH3GL3-204ENST00000492099 TRAV9-1A0A075B6T8 112 aa16.99■□□□□ 0.31
SH3GL3-204ENST00000492099 C2orf66Q6UXQ4 117 aa16.99■□□□□ 0.31
SH3GL3-204ENST00000492099 SEC11CQ9BY50 192 aa16.99■□□□□ 0.31
SH3GL3-204ENST00000492099 NXT2Q9NPJ8 142 aaKnown RBP16.99■□□□□ 0.31
SH3GL3-204ENST00000492099 TEX43Q6ZNM6 134 aa16.98■□□□□ 0.31
SH3GL3-204ENST00000492099 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.97■□□□□ 0.31
SH3GL3-204ENST00000492099 PRR3P79522 188 aaKnown RBP16.96■□□□□ 0.31
SH3GL3-204ENST00000492099 LINC00242Q5T6M2 205 aa16.96■□□□□ 0.31
SH3GL3-204ENST00000492099 Q6ZN92 141 aa16.96■□□□□ 0.31
SH3GL3-204ENST00000492099 C2orf88Q9BSF0 95 aa16.96■□□□□ 0.31
SH3GL3-204ENST00000492099 MRPL35Q9NZE8 188 aaKnown RBP16.96■□□□□ 0.31
SH3GL3-204ENST00000492099 A0A087WZ39 114 aa16.95■□□□□ 0.3
SH3GL3-204ENST00000492099 NPSP0C0P6 89 aa16.95■□□□□ 0.3
SH3GL3-204ENST00000492099 NDUFA1O15239 70 aa16.94■□□□□ 0.3
SH3GL3-204ENST00000492099 G0S2P27469 103 aa16.94■□□□□ 0.3
SH3GL3-204ENST00000492099 S100PP25815 95 aa16.93■□□□□ 0.3
SH3GL3-204ENST00000492099 RPL18AQ02543 176 aaKnown RBP16.93■□□□□ 0.3
SH3GL3-204ENST00000492099 SERTAD4-AS1Q5TG53 156 aa16.93■□□□□ 0.3
SH3GL3-204ENST00000492099 VCX2Q9H322 139 aa16.93■□□□□ 0.3
SH3GL3-204ENST00000492099 A0A0J9YXV3 536 aa16.92■□□□□ 0.3
SH3GL3-204ENST00000492099 UBE2D1P51668 147 aa16.92■□□□□ 0.3
SH3GL3-204ENST00000492099 COMMD7Q86VX2 200 aa16.92■□□□□ 0.3
SH3GL3-204ENST00000492099 AMELXQ99217 191 aa16.92■□□□□ 0.3
SH3GL3-204ENST00000492099 KIAA1644Q3SXP7 199 aa16.91■□□□□ 0.3
SH3GL3-204ENST00000492099 IGIPA6NJ69 53 aa16.9■□□□□ 0.3
SH3GL3-204ENST00000492099 LINC01561Q8N1V8 128 aa16.9■□□□□ 0.3
SH3GL3-204ENST00000492099 A0A1W2PNN7 141 aa16.89■□□□□ 0.29
SH3GL3-204ENST00000492099 PAPPA-AS1Q5QFB9 102 aa16.89■□□□□ 0.29
SH3GL3-204ENST00000492099 GNB1LQ9BYB4 327 aa16.89■□□□□ 0.29
SH3GL3-204ENST00000492099 C9orf116Q5BN46 136 aaPredicted RBP16.88■□□□□ 0.29
SH3GL3-204ENST00000492099 UNQ6190/PRO20217Q6UXQ8 127 aa16.88■□□□□ 0.29
SH3GL3-204ENST00000492099 Q6ZRP5 223 aa16.88■□□□□ 0.29
SH3GL3-204ENST00000492099 LINC00173Q6ZV60 143 aa16.88■□□□□ 0.29
SH3GL3-204ENST00000492099 KIAA0087Q14695 138 aa16.87■□□□□ 0.29
SH3GL3-204ENST00000492099 C10orf25Q5T742 122 aa16.87■□□□□ 0.29
SH3GL3-204ENST00000492099 TLX1NBP0CAT3 122 aa16.86■□□□□ 0.29
SH3GL3-204ENST00000492099 COX19Q49B96 90 aa16.86■□□□□ 0.29
SH3GL3-204ENST00000492099 ZC2HC1BQ5TFG8 222 aa16.86■□□□□ 0.29
SH3GL3-204ENST00000492099 C10orf91Q5T1B1 145 aa16.85■□□□□ 0.29
SH3GL3-204ENST00000492099 TOMM6Q96B49 74 aa16.85■□□□□ 0.29
SH3GL3-204ENST00000492099 TIMM17AQ99595 171 aa16.85■□□□□ 0.29
SH3GL3-204ENST00000492099 C6orf48Q9UBA6 75 aa16.85■□□□□ 0.29
SH3GL3-204ENST00000492099 FAM19A3Q7Z5A8 133 aa16.84■□□□□ 0.29
SH3GL3-204ENST00000492099 MT1HL1P0DM35 61 aa16.83■□□□□ 0.28
SH3GL3-204ENST00000492099 SEC11AP67812 179 aa16.83■□□□□ 0.28
SH3GL3-204ENST00000492099 RHEBQ15382 184 aa16.83■□□□□ 0.28
SH3GL3-204ENST00000492099 CARHSP1Q9Y2V2 147 aaKnown RBP16.82■□□□□ 0.28
SH3GL3-204ENST00000492099 TRBV30A0A0K0K1B3 111 aa16.81■□□□□ 0.28
SH3GL3-204ENST00000492099 SPINK6Q6UWN8 80 aa16.81■□□□□ 0.28
SH3GL3-204ENST00000492099 ALKBH7Q9BT30 221 aaPredicted RBP16.81■□□□□ 0.28
SH3GL3-204ENST00000492099 LINC01549A6NIU2 74 aa16.8■□□□□ 0.28
SH3GL3-204ENST00000492099 MT-ND6P03923 174 aa16.8■□□□□ 0.28
SH3GL3-204ENST00000492099 HERVK_113P63121 156 aa16.8■□□□□ 0.28
SH3GL3-204ENST00000492099 ERASQ7Z444 233 aa16.8■□□□□ 0.28
SH3GL3-204ENST00000492099 RPS10P5Q9NQ39 176 aa16.8■□□□□ 0.28
SH3GL3-204ENST00000492099 PACRGQ96M98 296 aaPredicted RBP16.79■□□□□ 0.28
SH3GL3-204ENST00000492099 SCGB3A1Q96QR1 104 aa16.79■□□□□ 0.28
SH3GL3-204ENST00000492099 LINC01546A6NGU7 62 aa16.78■□□□□ 0.28
SH3GL3-204ENST00000492099 PRSS2P07478 247 aa16.78■□□□□ 0.28
SH3GL3-204ENST00000492099 C2orf82Q6UX34 121 aa16.78■□□□□ 0.28
SH3GL3-204ENST00000492099 SRSF9Q13242 221 aaKnown RBP eCLIP16.77■□□□□ 0.28
SH3GL3-204ENST00000492099 FABP9Q0Z7S8 132 aa16.76■□□□□ 0.27
SH3GL3-204ENST00000492099 GAGE2EQ4V326 116 aa16.76■□□□□ 0.27
SH3GL3-204ENST00000492099 MRPL18Q9H0U6 180 aaKnown RBP16.76■□□□□ 0.27
SH3GL3-204ENST00000492099 GEMIN7Q9H840 131 aaKnown RBP16.76■□□□□ 0.27
SH3GL3-204ENST00000492099 GAGE2DQ9UEU5 116 aa16.76■□□□□ 0.27
SH3GL3-204ENST00000492099 PHF5AQ7RTV0 110 aaKnown RBP16.75■□□□□ 0.27
SH3GL3-204ENST00000492099 LINC01600Q96MT4 127 aa16.75■□□□□ 0.27
SH3GL3-204ENST00000492099 C6orf226Q5I0X4 101 aa16.74■□□□□ 0.27
SH3GL3-204ENST00000492099 REG3GQ6UW15 175 aa16.74■□□□□ 0.27
SH3GL3-204ENST00000492099 Q8IZM0 81 aa16.74■□□□□ 0.27
SH3GL3-204ENST00000492099 TOMM7Q9P0U1 55 aa16.74■□□□□ 0.27
SH3GL3-204ENST00000492099 CDKN2A-AS1Q9UH64 79 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms