RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CKS2P33552 79 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 RAB14P61106 215 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 STPG4Q8N801 248 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 LINC00526Q96FQ7 95 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 CARD19Q96LW7 228 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 C20orf78Q9BR46 151 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 SMDT1Q9H4I9 107 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 UBE2D4Q9Y2X8 147 aa5.22□□□□□ -1.57
LSM2-213ENST00000491421 CSDC2Q9Y534 153 aaKnown RBP5.22□□□□□ -1.57
LSM2-213ENST00000491421 TRAV13-1A0A0B4J241 112 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 F8W036 122 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 COX7A2LO14548 114 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 S100A8P05109 93 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 HBBP68871 147 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 SYCNQ0VAF6 134 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
LSM2-213ENST00000491421 MRPL54Q6P161 138 aaKnown RBP5.21□□□□□ -1.58
LSM2-213ENST00000491421 Q6ZRU5 148 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 TMEM18Q96B42 140 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 LINC00474Q9P2X8 69 aa5.21□□□□□ -1.58
LSM2-213ENST00000491421 TRBV24-1A0A075B6N3 115 aa5.2□□□□□ -1.58
LSM2-213ENST00000491421 D6R8Y8 96 aa5.2□□□□□ -1.58
LSM2-213ENST00000491421 TCAPO15273 167 aa5.2□□□□□ -1.58
LSM2-213ENST00000491421 RPL32P62910 135 aaKnown RBP5.2□□□□□ -1.58
LSM2-213ENST00000491421 Q6ZUT4 128 aa5.2□□□□□ -1.58
LSM2-213ENST00000491421 TIMM21Q9BVV7 248 aa5.2□□□□□ -1.58
LSM2-213ENST00000491421 IGLV4-69A0A075B6H9 119 aa5.19□□□□□ -1.58
LSM2-213ENST00000491421 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
LSM2-213ENST00000491421 SNRPEP62304 92 aaKnown RBP5.19□□□□□ -1.58
LSM2-213ENST00000491421 PRR3P79522 188 aaKnown RBP5.19□□□□□ -1.58
LSM2-213ENST00000491421 SMIM2Q9BVW6 85 aa5.19□□□□□ -1.58
LSM2-213ENST00000491421 LOC107984640A0A0U1RRK4 108 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 APOMO95445 188 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 NPYP01303 97 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 PPBPP02775 128 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 RPL39P62891 51 aaKnown RBP5.18□□□□□ -1.58
LSM2-213ENST00000491421 C5orf38Q86SI9 138 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 CAMK2N2Q96S95 79 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 SPANXA1Q9NS26 97 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 PLA2G2DQ9UNK4 145 aa5.18□□□□□ -1.58
LSM2-213ENST00000491421 TRIAP1O43715 76 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 RAB5AP20339 215 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 SPAG11BQ08648 103 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 GAGE2BQ13066 116 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 ATP5L2Q7Z4Y8 100 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 C2orf48Q96LS8 159 aa5.17□□□□□ -1.58
LSM2-213ENST00000491421 IFITM10A6NMD0 228 aa5.16□□□□□ -1.58
LSM2-213ENST00000491421 MRPS36P82909 103 aaKnown RBP5.16□□□□□ -1.58
LSM2-213ENST00000491421 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
LSM2-213ENST00000491421 TMEM136Q6ZRR5 245 aa5.16□□□□□ -1.58
LSM2-213ENST00000491421 OR10D4PQ8NGN7 298 aa5.16□□□□□ -1.58
LSM2-213ENST00000491421 FAM104AQ969W3 186 aa5.16□□□□□ -1.58
LSM2-213ENST00000491421 PRELID3AQ96N28 172 aa5.16□□□□□ -1.58
LSM2-213ENST00000491421 OPRPNQ99935 248 aaPredicted RBP5.16□□□□□ -1.58
LSM2-213ENST00000491421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.15□□□□□ -1.59
LSM2-213ENST00000491421 MT-ND4LP03901 98 aa5.15□□□□□ -1.59
LSM2-213ENST00000491421 RPL18AQ02543 176 aaKnown RBP5.15□□□□□ -1.59
LSM2-213ENST00000491421 PNRC1Q12796 327 aaPredicted RBP5.15□□□□□ -1.59
LSM2-213ENST00000491421 VAMP3Q15836 100 aa5.15□□□□□ -1.59
LSM2-213ENST00000491421 C6orf226Q5I0X4 101 aa5.15□□□□□ -1.59
LSM2-213ENST00000491421 ORAOV1Q8WV07 137 aa5.15□□□□□ -1.59
LSM2-213ENST00000491421 IGHV3OR16-9A0A0B4J2B5 98 aa5.14□□□□□ -1.59
LSM2-213ENST00000491421 A0A0J9YXV3 536 aa5.14□□□□□ -1.59
LSM2-213ENST00000491421 IFI27P40305 119 aaPredicted RBP5.14□□□□□ -1.59
LSM2-213ENST00000491421 HERV-K104P63124 156 aa5.14□□□□□ -1.59
LSM2-213ENST00000491421 Q6ZRP5 223 aa5.14□□□□□ -1.59
LSM2-213ENST00000491421 LAMTOR2Q9Y2Q5 125 aa5.14□□□□□ -1.59
LSM2-213ENST00000491421 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
LSM2-213ENST00000491421 TGIF2-C20orf24A0A0A6YYL0 155 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 LOC389332A0A1B0GUA5 103 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 A0A1W2PNN7 141 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 NDUFA1O15239 70 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 C9orf116Q5BN46 136 aaPredicted RBP5.13□□□□□ -1.59
LSM2-213ENST00000491421 SPINK6Q6UWN8 80 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 LINC01600Q96MT4 127 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 MAP1LC3AQ9H492 121 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 MRPL35Q9NZE8 188 aaKnown RBP5.13□□□□□ -1.59
LSM2-213ENST00000491421 PYGO1Q9Y3Y4 419 aa5.13□□□□□ -1.59
LSM2-213ENST00000491421 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
LSM2-213ENST00000491421 S100A12P80511 92 aa5.12□□□□□ -1.59
LSM2-213ENST00000491421 REG3GQ6UW15 175 aa5.12□□□□□ -1.59
LSM2-213ENST00000491421 TMEM141Q96I45 108 aa5.12□□□□□ -1.59
LSM2-213ENST00000491421 IMMP2LQ96T52 175 aa5.12□□□□□ -1.59
LSM2-213ENST00000491421 A0A087WZ39 114 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 MT-ND6P03923 174 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 LINC00242Q5T6M2 205 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 C2orf66Q6UXQ4 117 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 UNQ6190/PRO20217Q6UXQ8 127 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 Q6ZN92 141 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 TEX43Q6ZNM6 134 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 Q8N8P6 123 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 CYSLTR1Q9Y271 337 aa5.11□□□□□ -1.59
LSM2-213ENST00000491421 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
LSM2-213ENST00000491421 UBE2D1P51668 147 aa5.1□□□□□ -1.59
LSM2-213ENST00000491421 SRSF9Q13242 221 aaKnown RBP eCLIP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms