RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 Q6ZUT4 128 aa4.58□□□□□ -1.68
PRPF4B-208ENST00000490653 C5orf38Q86SI9 138 aa4.58□□□□□ -1.68
PRPF4B-208ENST00000490653 MRPL52Q86TS9 123 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-208ENST00000490653 STPG4Q8N801 248 aa4.58□□□□□ -1.68
PRPF4B-208ENST00000490653 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 IGHV1-58A0A0C4DH39 117 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 D6R8Y8 96 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 TNFRSF6BO95407 300 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 NPYP01303 97 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 FCER1GP30273 86 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 CKS2P33552 79 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 CD164L2Q6UWJ8 174 aa4.57□□□□□ -1.68
PRPF4B-208ENST00000490653 IGLV4-69A0A075B6H9 119 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 TRBV24-1A0A075B6N3 115 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 A0A0J9YXV3 536 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 A0A1W2PNN7 141 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 ZC2HC1BQ5TFG8 222 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 Q6ZRU5 148 aa4.56□□□□□ -1.68
PRPF4B-208ENST00000490653 LINC00862A6NCI5 91 aa4.55□□□□□ -1.68
PRPF4B-208ENST00000490653 GAGE2BQ13066 116 aa4.55□□□□□ -1.68
PRPF4B-208ENST00000490653 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
PRPF4B-208ENST00000490653 KIR2DL4Q99706 377 aa4.55□□□□□ -1.68
PRPF4B-208ENST00000490653 C20orf78Q9BR46 151 aa4.55□□□□□ -1.68
PRPF4B-208ENST00000490653 CSDC2Q9Y534 153 aaKnown RBP4.55□□□□□ -1.68
PRPF4B-208ENST00000490653 LOC389332A0A1B0GUA5 103 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 C1orf196B1AJZ1 125 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 COX7A2LO14548 114 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 PPP1R2P9O14990 202 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 PPP1R17O96001 155 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 RPL32P62910 135 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 HBBP68871 147 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 TMEM136Q6ZRR5 245 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 TIMM21Q9BVV7 248 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 SMIM2Q9BVW6 85 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 SMDT1Q9H4I9 107 aa4.54□□□□□ -1.68
PRPF4B-208ENST00000490653 A0A1B0GW15 77 aa4.53□□□□□ -1.68
PRPF4B-208ENST00000490653 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.53□□□□□ -1.68
PRPF4B-208ENST00000490653 MALP21145 153 aa4.53□□□□□ -1.68
PRPF4B-208ENST00000490653 PTTG1IPP53801 180 aa4.53□□□□□ -1.68
PRPF4B-208ENST00000490653 PRR3P79522 188 aaKnown RBP4.53□□□□□ -1.68
PRPF4B-208ENST00000490653 PRELID3AQ96N28 172 aa4.53□□□□□ -1.68
PRPF4B-208ENST00000490653 IGHV3OR16-9A0A0B4J2B5 98 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 F8W036 122 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 IFITM2Q01629 132 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 SRSF9Q13242 221 aaKnown RBP eCLIP4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 PHF5AQ7RTV0 110 aaKnown RBP4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 C7orf33Q8WU49 177 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 CAMK2N2Q96S95 79 aa4.52□□□□□ -1.69
PRPF4B-208ENST00000490653 IGLV4-3A0A075B6K6 122 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 LOC107984640A0A0U1RRK4 108 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 FAM168BA1KXE4 195 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 MRPS36P82909 103 aaKnown RBP4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 SPAG11BQ08648 103 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 KIAA0087Q14695 138 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 C9orf116Q5BN46 136 aaPredicted RBP4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 ORMDL3Q8N138 153 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 ORAOV1Q8WV07 137 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 TMEM18Q96B42 140 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
PRPF4B-208ENST00000490653 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 PRSS47A8MTI9 375 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 PPBPP02775 128 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 S100A8P05109 93 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 ADCYAP1P18509 176 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 RPL18AQ02543 176 aaKnown RBP4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 KIAA1644Q3SXP7 199 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 LINC00242Q5T6M2 205 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 C6orf48Q9UBA6 75 aa4.5□□□□□ -1.69
PRPF4B-208ENST00000490653 LPAP08519 4548 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 APOMO95445 188 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 C2orf82Q6UX34 121 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 Q6ZRP5 223 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 LINC00173Q6ZV60 143 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 ATP5L2Q7Z4Y8 100 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
PRPF4B-208ENST00000490653 MT-ND4LP03901 98 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 RAB5AP20339 215 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 IFI27P40305 119 aaPredicted RBP4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 UBE2D1P51668 147 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 CLLU1Q5K131 121 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 Q8N8P6 123 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 IMMP2LQ96T52 175 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 MAP1LC3AQ9H492 121 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 LINC00474Q9P2X8 69 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
PRPF4B-208ENST00000490653 A0A087WZ39 114 aa4.47□□□□□ -1.69
PRPF4B-208ENST00000490653 TMEM218A2RU14 115 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms