RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CCL25O15444 150 aa6.83□□□□□ -1.32
TTC28-207ENST00000490475 HBDP02042 147 aa6.83□□□□□ -1.32
TTC28-207ENST00000490475 NXT2Q9NPJ8 142 aaKnown RBP6.83□□□□□ -1.32
TTC28-207ENST00000490475 KLK12Q9UKR0 248 aa6.83□□□□□ -1.32
TTC28-207ENST00000490475 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.82□□□□□ -1.32
TTC28-207ENST00000490475 A6NDN8 102 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 SMKR1H3BMG3 65 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 CRPP02741 224 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 GAGE6Q13070 117 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 MPV17L2Q567V2 206 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 UBE2WQ96B02 151 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 PRELID3AQ96N28 172 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 C1orf43Q9BWL3 253 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 FAM30AQ9NZY2 134 aa6.82□□□□□ -1.32
TTC28-207ENST00000490475 TRBV25-1A0A075B6N4 114 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 SDHAF1A6NFY7 115 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 K7EMI3 77 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 TAX1BP3O14907 124 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 NCR2O95944 276 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 HSD52Q0P140 79 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 VAMP3Q15836 100 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
TTC28-207ENST00000490475 hDV102S1A0JD36 115 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 TMEM238C9JI98 176 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 H3BRM9 83 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 LECT2O14960 151 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 HAMPP81172 84 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 WFDC2Q14508 124 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 MRPL51Q4U2R6 128 aaKnown RBP6.8□□□□□ -1.32
TTC28-207ENST00000490475 ENHOQ6UWT2 76 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 MRAP2Q96G30 205 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 MAP1LC3AQ9H492 121 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 HIGD1BQ9P298 99 aa6.8□□□□□ -1.32
TTC28-207ENST00000490475 TRBV6-5A0A0K0K1A5 114 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 LINC01549A6NIU2 74 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
TTC28-207ENST00000490475 D6R8Y8 96 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 ATP5LO75964 103 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
TTC28-207ENST00000490475 CKS2P33552 79 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 MIAQ16674 131 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 LINC00173Q6ZV60 143 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 TMEM243Q9BU79 118 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
TTC28-207ENST00000490475 HERC1Q15751 4861 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 A0A096LNJ9 63 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 I3L3M4 83 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 K7ERU9 68 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 FGF6P10767 208 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 FCER1GP30273 86 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 IFI27P40305 119 aaPredicted RBP6.78□□□□□ -1.32
TTC28-207ENST00000490475 POLR2KP53803 58 aaKnown RBP6.78□□□□□ -1.32
TTC28-207ENST00000490475 DGAT2L7PQ6IED9 249 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 C2orf91Q6ZV80 131 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 LINC00269Q8N2A0 174 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 NRACQ8N912 160 aa6.78□□□□□ -1.32
TTC28-207ENST00000490475 IGLV4-60A0A075B6I1 120 aa6.77□□□□□ -1.33
TTC28-207ENST00000490475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
TTC28-207ENST00000490475 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
TTC28-207ENST00000490475 TSHBP01222 138 aa6.77□□□□□ -1.33
TTC28-207ENST00000490475 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
TTC28-207ENST00000490475 OR5A1Q8NGJ0 315 aa6.77□□□□□ -1.33
TTC28-207ENST00000490475 FAT1Q14517 4588 aa6.77□□□□□ -1.33
TTC28-207ENST00000490475 TRBV27A0A0K0K1C4 114 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 A0A1B0GUV1 79 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 C9orf118A6NHY6 69 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 VCYO14598 125 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 UBE2L6O14933 153 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 PPP1R17O96001 155 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 TAL2Q16559 108 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 CLPSL2Q6UWE3 100 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 Q8N8P6 123 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
TTC28-207ENST00000490475 TNFRSF6BO95407 300 aa6.75□□□□□ -1.33
TTC28-207ENST00000490475 OXTP01178 125 aa6.75□□□□□ -1.33
TTC28-207ENST00000490475 SCGB1A1P11684 91 aa6.75□□□□□ -1.33
TTC28-207ENST00000490475 SUMO2P61956 95 aaKnown RBP6.75□□□□□ -1.33
TTC28-207ENST00000490475 SERTAD4-AS1Q5TG53 156 aa6.75□□□□□ -1.33
TTC28-207ENST00000490475 CST9LQ9H4G1 147 aa6.75□□□□□ -1.33
TTC28-207ENST00000490475 PRR34Q9NV39 138 aa6.75□□□□□ -1.33
TTC28-207ENST00000490475 TRAV8-4A0A0B4J246 113 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 NPYP01303 97 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 REG3AQ06141 175 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 OCIAD2Q56VL3 154 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 CIRBP-AS1Q8TBR5 109 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
TTC28-207ENST00000490475 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 TRAV12-1A0A0B4J245 112 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 USP17L23D6RBM5 183 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 DPM2O94777 84 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 PLNP26678 52 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
TTC28-207ENST00000490475 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms