RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
SEC13-218ENST00000490283 CTDSP1Q9GZU7 261 aa11.04□□□□□ -0.64
SEC13-218ENST00000490283 LOC107984640A0A0U1RRK4 108 aa11.03□□□□□ -0.64
SEC13-218ENST00000490283 PRSS47A8MTI9 375 aa11.03□□□□□ -0.64
SEC13-218ENST00000490283 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
SEC13-218ENST00000490283 OPRPNQ99935 248 aaPredicted RBP11.03□□□□□ -0.64
SEC13-218ENST00000490283 PYGO1Q9Y3Y4 419 aa11.03□□□□□ -0.64
SEC13-218ENST00000490283 TGIF2-C20orf24A0A0A6YYL0 155 aa11.02□□□□□ -0.65
SEC13-218ENST00000490283 TMEM218A2RU14 115 aa11.02□□□□□ -0.65
SEC13-218ENST00000490283 Q6ZRU5 148 aa11.02□□□□□ -0.65
SEC13-218ENST00000490283 Q8N8P6 123 aa11.02□□□□□ -0.65
SEC13-218ENST00000490283 CYSLTR1Q9Y271 337 aa11.02□□□□□ -0.65
SEC13-218ENST00000490283 ORMDL2Q53FV1 153 aa11.01□□□□□ -0.65
SEC13-218ENST00000490283 Q6ZN92 141 aa11.01□□□□□ -0.65
SEC13-218ENST00000490283 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
SEC13-218ENST00000490283 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
SEC13-218ENST00000490283 HERC1Q15751 4861 aa11.01□□□□□ -0.65
SEC13-218ENST00000490283 K7EMI3 77 aa11□□□□□ -0.65
SEC13-218ENST00000490283 S100PP25815 95 aa11□□□□□ -0.65
SEC13-218ENST00000490283 HNRNPA3P51991 378 aaKnown RBP11□□□□□ -0.65
SEC13-218ENST00000490283 GAGE2BQ13066 116 aa11□□□□□ -0.65
SEC13-218ENST00000490283 TEX43Q6ZNM6 134 aa11□□□□□ -0.65
SEC13-218ENST00000490283 C2orf88Q9BSF0 95 aa11□□□□□ -0.65
SEC13-218ENST00000490283 NXT2Q9NPJ8 142 aaKnown RBP11□□□□□ -0.65
SEC13-218ENST00000490283 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 TRAV9-1A0A075B6T8 112 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 F8WDY8 70 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 ADCYAP1P18509 176 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 PTTG1IPP53801 180 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 IFITM2Q01629 132 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 C2orf66Q6UXQ4 117 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 SEC11CQ9BY50 192 aa10.99□□□□□ -0.65
SEC13-218ENST00000490283 G0S2P27469 103 aa10.98□□□□□ -0.65
SEC13-218ENST00000490283 NDUFA1O15239 70 aa10.97□□□□□ -0.65
SEC13-218ENST00000490283 RPL18AQ02543 176 aaKnown RBP10.97□□□□□ -0.65
SEC13-218ENST00000490283 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
SEC13-218ENST00000490283 COMMD7Q86VX2 200 aa10.96□□□□□ -0.65
SEC13-218ENST00000490283 VCX2Q9H322 139 aa10.96□□□□□ -0.65
SEC13-218ENST00000490283 NPSP0C0P6 89 aa10.95□□□□□ -0.66
SEC13-218ENST00000490283 PAPPA-AS1Q5QFB9 102 aa10.95□□□□□ -0.66
SEC13-218ENST00000490283 MRPL35Q9NZE8 188 aaKnown RBP10.95□□□□□ -0.66
SEC13-218ENST00000490283 A0A087WZ39 114 aa10.94□□□□□ -0.66
SEC13-218ENST00000490283 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
SEC13-218ENST00000490283 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
SEC13-218ENST00000490283 LINC00242Q5T6M2 205 aa10.94□□□□□ -0.66
SEC13-218ENST00000490283 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
SEC13-218ENST00000490283 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
SEC13-218ENST00000490283 A0A0J9YXV3 536 aa10.92□□□□□ -0.66
SEC13-218ENST00000490283 UBE2D1P51668 147 aa10.92□□□□□ -0.66
SEC13-218ENST00000490283 COX19Q49B96 90 aa10.92□□□□□ -0.66
SEC13-218ENST00000490283 Q6ZRP5 223 aa10.91□□□□□ -0.66
SEC13-218ENST00000490283 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
SEC13-218ENST00000490283 GNB1LQ9BYB4 327 aa10.91□□□□□ -0.66
SEC13-218ENST00000490283 PKHD1L1Q86WI1 4243 aa10.9□□□□□ -0.66
SEC13-218ENST00000490283 SEC11AP67812 179 aa10.9□□□□□ -0.66
SEC13-218ENST00000490283 RHEBQ15382 184 aa10.9□□□□□ -0.66
SEC13-218ENST00000490283 C9orf116Q5BN46 136 aaPredicted RBP10.9□□□□□ -0.66
SEC13-218ENST00000490283 AMELXQ99217 191 aa10.9□□□□□ -0.66
SEC13-218ENST00000490283 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
SEC13-218ENST00000490283 MT-ND6P03923 174 aa10.89□□□□□ -0.67
SEC13-218ENST00000490283 PRSS2P07478 247 aa10.89□□□□□ -0.67
SEC13-218ENST00000490283 UNQ6190/PRO20217Q6UXQ8 127 aa10.89□□□□□ -0.67
SEC13-218ENST00000490283 PACRGQ96M98 296 aaPredicted RBP10.89□□□□□ -0.67
SEC13-218ENST00000490283 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
SEC13-218ENST00000490283 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
SEC13-218ENST00000490283 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
SEC13-218ENST00000490283 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
SEC13-218ENST00000490283 LINC00173Q6ZV60 143 aa10.88□□□□□ -0.67
SEC13-218ENST00000490283 TOMM6Q96B49 74 aa10.88□□□□□ -0.67
SEC13-218ENST00000490283 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
SEC13-218ENST00000490283 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
SEC13-218ENST00000490283 HERVK_113P63121 156 aa10.87□□□□□ -0.67
SEC13-218ENST00000490283 C10orf25Q5T742 122 aa10.87□□□□□ -0.67
SEC13-218ENST00000490283 GEMIN7Q9H840 131 aaKnown RBP10.87□□□□□ -0.67
SEC13-218ENST00000490283 C6orf48Q9UBA6 75 aa10.87□□□□□ -0.67
SEC13-218ENST00000490283 TLX1NBP0CAT3 122 aa10.86□□□□□ -0.67
SEC13-218ENST00000490283 C10orf91Q5T1B1 145 aa10.86□□□□□ -0.67
SEC13-218ENST00000490283 ERASQ7Z444 233 aa10.86□□□□□ -0.67
SEC13-218ENST00000490283 SCGB3A1Q96QR1 104 aa10.86□□□□□ -0.67
SEC13-218ENST00000490283 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
SEC13-218ENST00000490283 LRP1Q07954 4544 aaKnown RBP10.85□□□□□ -0.67
SEC13-218ENST00000490283 CKS1BP61024 79 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 FABP9Q0Z7S8 132 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 KIAA0087Q14695 138 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 SPINK6Q6UWN8 80 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 FA2HQ7L5A8 372 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 ALKBH7Q9BT30 221 aaPredicted RBP10.85□□□□□ -0.67
SEC13-218ENST00000490283 MRPL18Q9H0U6 180 aaKnown RBP10.85□□□□□ -0.67
SEC13-218ENST00000490283 SMCO4Q9NRQ5 59 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
SEC13-218ENST00000490283 GAGE2EQ4V326 116 aa10.84□□□□□ -0.67
SEC13-218ENST00000490283 C6orf226Q5I0X4 101 aa10.84□□□□□ -0.67
SEC13-218ENST00000490283 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
SEC13-218ENST00000490283 GAGE2DQ9UEU5 116 aa10.84□□□□□ -0.67
SEC13-218ENST00000490283 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
SEC13-218ENST00000490283 C2orf82Q6UX34 121 aa10.83□□□□□ -0.68
SEC13-218ENST00000490283 FAT3Q8TDW7 4589 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms