RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 IGHV3OR16-9A0A0B4J2B5 98 aa15.71■□□□□ 0.11
HMGN1-217ENST00000489072 OXTP01178 125 aa15.71■□□□□ 0.11
HMGN1-217ENST00000489072 IMMP2LQ96T52 175 aa15.71■□□□□ 0.11
HMGN1-217ENST00000489072 PKIGQ9Y2B9 76 aa15.71■□□□□ 0.11
HMGN1-217ENST00000489072 PYGO1Q9Y3Y4 419 aa15.71■□□□□ 0.11
HMGN1-217ENST00000489072 APOMO95445 188 aa15.7■□□□□ 0.1
HMGN1-217ENST00000489072 IFI27P40305 119 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-217ENST00000489072 Q8N8P6 123 aa15.7■□□□□ 0.1
HMGN1-217ENST00000489072 CAMK2N2Q96S95 79 aa15.7■□□□□ 0.1
HMGN1-217ENST00000489072 IGLV4-3A0A075B6K6 122 aa15.69■□□□□ 0.1
HMGN1-217ENST00000489072 SPAG11BQ08648 103 aa15.69■□□□□ 0.1
HMGN1-217ENST00000489072 C2orf48Q96LS8 159 aa15.69■□□□□ 0.1
HMGN1-217ENST00000489072 LINC00474Q9P2X8 69 aa15.69■□□□□ 0.1
HMGN1-217ENST00000489072 C7orf33Q8WU49 177 aa15.68■□□□□ 0.1
HMGN1-217ENST00000489072 CTDSP1Q9GZU7 261 aa15.67■□□□□ 0.1
HMGN1-217ENST00000489072 LOC107984640A0A0U1RRK4 108 aa15.66■□□□□ 0.1
HMGN1-217ENST00000489072 PTTG1IPP53801 180 aa15.66■□□□□ 0.1
HMGN1-217ENST00000489072 OR10D4PQ8NGN7 298 aa15.66■□□□□ 0.1
HMGN1-217ENST00000489072 C2orf66Q6UXQ4 117 aa15.65■□□□□ 0.1
HMGN1-217ENST00000489072 ORAOV1Q8WV07 137 aa15.65■□□□□ 0.1
HMGN1-217ENST00000489072 TMEM141Q96I45 108 aa15.65■□□□□ 0.1
HMGN1-217ENST00000489072 SEC11CQ9BY50 192 aa15.65■□□□□ 0.1
HMGN1-217ENST00000489072 GAGE2BQ13066 116 aa15.64■□□□□ 0.09
HMGN1-217ENST00000489072 COMMD7Q86VX2 200 aa15.64■□□□□ 0.09
HMGN1-217ENST00000489072 CYSLTR1Q9Y271 337 aa15.64■□□□□ 0.09
HMGN1-217ENST00000489072 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-217ENST00000489072 KIAA1644Q3SXP7 199 aa15.63■□□□□ 0.09
HMGN1-217ENST00000489072 LINC00242Q5T6M2 205 aa15.63■□□□□ 0.09
HMGN1-217ENST00000489072 A0A0J9YXV3 536 aa15.62■□□□□ 0.09
HMGN1-217ENST00000489072 ORMDL2Q53FV1 153 aa15.62■□□□□ 0.09
HMGN1-217ENST00000489072 ZC2HC1BQ5TFG8 222 aa15.62■□□□□ 0.09
HMGN1-217ENST00000489072 TRAV9-1A0A075B6T8 112 aa15.61■□□□□ 0.09
HMGN1-217ENST00000489072 TGIF2-C20orf24A0A0A6YYL0 155 aa15.61■□□□□ 0.09
HMGN1-217ENST00000489072 PRR3P79522 188 aaKnown RBP15.61■□□□□ 0.09
HMGN1-217ENST00000489072 LINC00173Q6ZV60 143 aa15.61■□□□□ 0.09
HMGN1-217ENST00000489072 NXT2Q9NPJ8 142 aaKnown RBP15.61■□□□□ 0.09
HMGN1-217ENST00000489072 TEX43Q6ZNM6 134 aa15.6■□□□□ 0.09
HMGN1-217ENST00000489072 A0A087WZ39 114 aa15.59■□□□□ 0.09
HMGN1-217ENST00000489072 K7EMI3 77 aa15.59■□□□□ 0.09
HMGN1-217ENST00000489072 UBE2D1P51668 147 aa15.59■□□□□ 0.09
HMGN1-217ENST00000489072 RNF151Q2KHN1 245 aa15.59■□□□□ 0.09
HMGN1-217ENST00000489072 C10orf25Q5T742 122 aa15.59■□□□□ 0.09
HMGN1-217ENST00000489072 A0A1W2PNN7 141 aa15.58■□□□□ 0.08
HMGN1-217ENST00000489072 IGIPA6NJ69 53 aa15.58■□□□□ 0.08
HMGN1-217ENST00000489072 AMELXQ99217 191 aa15.58■□□□□ 0.08
HMGN1-217ENST00000489072 MRPL35Q9NZE8 188 aaKnown RBP15.58■□□□□ 0.08
HMGN1-217ENST00000489072 F8WDY8 70 aa15.57■□□□□ 0.08
HMGN1-217ENST00000489072 RPL18AQ02543 176 aaKnown RBP15.57■□□□□ 0.08
HMGN1-217ENST00000489072 C10orf91Q5T1B1 145 aa15.57■□□□□ 0.08
HMGN1-217ENST00000489072 NDUFA1O15239 70 aa15.56■□□□□ 0.08
HMGN1-217ENST00000489072 KIAA0087Q14695 138 aa15.56■□□□□ 0.08
HMGN1-217ENST00000489072 UNQ6190/PRO20217Q6UXQ8 127 aa15.56■□□□□ 0.08
HMGN1-217ENST00000489072 C2orf88Q9BSF0 95 aa15.56■□□□□ 0.08
HMGN1-217ENST00000489072 S100PP25815 95 aa15.55■□□□□ 0.08
HMGN1-217ENST00000489072 Q6ZN92 141 aa15.55■□□□□ 0.08
HMGN1-217ENST00000489072 VCX2Q9H322 139 aa15.55■□□□□ 0.08
HMGN1-217ENST00000489072 NPSP0C0P6 89 aa15.54■□□□□ 0.08
HMGN1-217ENST00000489072 GNB1LQ9BYB4 327 aa15.54■□□□□ 0.08
HMGN1-217ENST00000489072 C6orf48Q9UBA6 75 aa15.54■□□□□ 0.08
HMGN1-217ENST00000489072 MT1HL1P0DM35 61 aa15.53■□□□□ 0.08
HMGN1-217ENST00000489072 CARHSP1Q9Y2V2 147 aaKnown RBP15.53■□□□□ 0.08
HMGN1-217ENST00000489072 C9orf116Q5BN46 136 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-217ENST00000489072 TOMM6Q96B49 74 aa15.52■□□□□ 0.08
HMGN1-217ENST00000489072 ALKBH7Q9BT30 221 aaPredicted RBP15.51■□□□□ 0.07
HMGN1-217ENST00000489072 HMCN2Q8NDA2 5059 aa15.5■□□□□ 0.07
HMGN1-217ENST00000489072 FAM19A3Q7Z5A8 133 aa15.5■□□□□ 0.07
HMGN1-217ENST00000489072 LINC01561Q8N1V8 128 aa15.5■□□□□ 0.07
HMGN1-217ENST00000489072 TLX1NBP0CAT3 122 aa15.49■□□□□ 0.07
HMGN1-217ENST00000489072 RHEBQ15382 184 aa15.49■□□□□ 0.07
HMGN1-217ENST00000489072 Q6ZRP5 223 aa15.49■□□□□ 0.07
HMGN1-217ENST00000489072 TIMM17AQ99595 171 aa15.49■□□□□ 0.07
HMGN1-217ENST00000489072 RPS10P5Q9NQ39 176 aa15.49■□□□□ 0.07
HMGN1-217ENST00000489072 G0S2P27469 103 aa15.48■□□□□ 0.07
HMGN1-217ENST00000489072 C2orf82Q6UX34 121 aa15.48■□□□□ 0.07
HMGN1-217ENST00000489072 LINC01546A6NGU7 62 aa15.47■□□□□ 0.07
HMGN1-217ENST00000489072 COX19Q49B96 90 aa15.46■□□□□ 0.07
HMGN1-217ENST00000489072 SERTAD4-AS1Q5TG53 156 aa15.46■□□□□ 0.07
HMGN1-217ENST00000489072 MRPL18Q9H0U6 180 aaKnown RBP15.46■□□□□ 0.07
HMGN1-217ENST00000489072 PAPPA-AS1Q5QFB9 102 aa15.45■□□□□ 0.06
HMGN1-217ENST00000489072 PHF5AQ7RTV0 110 aaKnown RBP15.45■□□□□ 0.06
HMGN1-217ENST00000489072 ERASQ7Z444 233 aa15.45■□□□□ 0.06
HMGN1-217ENST00000489072 TNXBP22105 4242 aa15.45■□□□□ 0.06
HMGN1-217ENST00000489072 FAM168BA1KXE4 195 aa15.44■□□□□ 0.06
HMGN1-217ENST00000489072 MT-ND6P03923 174 aa15.44■□□□□ 0.06
HMGN1-217ENST00000489072 FABP9Q0Z7S8 132 aa15.44■□□□□ 0.06
HMGN1-217ENST00000489072 SCGB3A1Q96QR1 104 aa15.44■□□□□ 0.06
HMGN1-217ENST00000489072 TRBV30A0A0K0K1B3 111 aa15.43■□□□□ 0.06
HMGN1-217ENST00000489072 SRSF9Q13242 221 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGN1-217ENST00000489072 GAGE2EQ4V326 116 aa15.43■□□□□ 0.06
HMGN1-217ENST00000489072 GAGE2DQ9UEU5 116 aa15.43■□□□□ 0.06
HMGN1-217ENST00000489072 CDKN2A-AS1Q9UH64 79 aa15.43■□□□□ 0.06
HMGN1-217ENST00000489072 HERVK_113P63121 156 aa15.42■□□□□ 0.06
HMGN1-217ENST00000489072 SEC11AP67812 179 aa15.41■□□□□ 0.06
HMGN1-217ENST00000489072 SPINK6Q6UWN8 80 aa15.41■□□□□ 0.06
HMGN1-217ENST00000489072 TOMM7Q9P0U1 55 aa15.41■□□□□ 0.06
HMGN1-217ENST00000489072 PSORS1C2Q9UIG4 136 aa15.41■□□□□ 0.06
HMGN1-217ENST00000489072 PRSS2P07478 247 aa15.39■□□□□ 0.05
HMGN1-217ENST00000489072 KRTAP7-1Q8IUC3 87 aa15.39■□□□□ 0.05
HMGN1-217ENST00000489072 Q8IZM0 81 aa15.39■□□□□ 0.05
HMGN1-217ENST00000489072 PACRGQ96M98 296 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms