RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 RPL37AP61513 92 aaKnown RBP7.88□□□□□ -1.15
SDC3-204ENST00000487984 PACRGQ96M98 296 aaPredicted RBP7.88□□□□□ -1.15
SDC3-204ENST00000487984 FAT3Q8TDW7 4589 aa7.87□□□□□ -1.15
SDC3-204ENST00000487984 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.87□□□□□ -1.15
SDC3-204ENST00000487984 IGKV3OR2-268A0A0C4DH90 116 aa7.87□□□□□ -1.15
SDC3-204ENST00000487984 IGKV2-29A2NJV5 120 aaPredicted RBP7.87□□□□□ -1.15
SDC3-204ENST00000487984 HBDP02042 147 aa7.87□□□□□ -1.15
SDC3-204ENST00000487984 SLPIP03973 132 aa7.87□□□□□ -1.15
SDC3-204ENST00000487984 SMAGPQ0VAQ4 97 aa7.87□□□□□ -1.15
SDC3-204ENST00000487984 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
SDC3-204ENST00000487984 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
SDC3-204ENST00000487984 CIRBPQ14011 172 aaKnown RBP7.86□□□□□ -1.15
SDC3-204ENST00000487984 PDZD11Q5EBL8 140 aa7.86□□□□□ -1.15
SDC3-204ENST00000487984 AMMECR1LQ6DCA0 310 aa7.86□□□□□ -1.15
SDC3-204ENST00000487984 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
SDC3-204ENST00000487984 URB1-AS1Q96HZ7 61 aa7.86□□□□□ -1.15
SDC3-204ENST00000487984 PKHD1L1Q86WI1 4243 aa7.86□□□□□ -1.15
SDC3-204ENST00000487984 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
SDC3-204ENST00000487984 OXTP01178 125 aa7.85□□□□□ -1.15
SDC3-204ENST00000487984 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
SDC3-204ENST00000487984 LINC00310P59036 64 aa7.85□□□□□ -1.15
SDC3-204ENST00000487984 HSPB8Q9UJY1 196 aa7.85□□□□□ -1.15
SDC3-204ENST00000487984 CYSLTR1Q9Y271 337 aa7.85□□□□□ -1.15
SDC3-204ENST00000487984 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.84□□□□□ -1.15
SDC3-204ENST00000487984 H7C423 109 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 NUPR1O60356 82 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 LEPROTL1O95214 131 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 TSHBP01222 138 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 FGF6P10767 208 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 FABP4P15090 132 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
SDC3-204ENST00000487984 CHCHD10Q8WYQ3 142 aaPredicted RBP7.84□□□□□ -1.15
SDC3-204ENST00000487984 ATP5LO75964 103 aa7.83□□□□□ -1.16
SDC3-204ENST00000487984 CHTF8P0CG12 524 aa7.83□□□□□ -1.16
SDC3-204ENST00000487984 CFAP161Q6P656 301 aa7.83□□□□□ -1.16
SDC3-204ENST00000487984 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
SDC3-204ENST00000487984 PMCHL1Q16048 86 aa7.82□□□□□ -1.16
SDC3-204ENST00000487984 HIGD2BQ4VC39 106 aa7.82□□□□□ -1.16
SDC3-204ENST00000487984 C2orf66Q6UXQ4 117 aa7.82□□□□□ -1.16
SDC3-204ENST00000487984 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
SDC3-204ENST00000487984 TOMM6Q96B49 74 aa7.82□□□□□ -1.16
SDC3-204ENST00000487984 A0A087WYN8 130 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 ZNF25P17030 456 aaPredicted RBP7.81□□□□□ -1.16
SDC3-204ENST00000487984 FOXI1Q12951 378 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 PAPPA-AS1Q5QFB9 102 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 DPH3Q96FX2 82 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 SCGB3A1Q96QR1 104 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 MAP1LC3CQ9BXW4 147 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
SDC3-204ENST00000487984 GVQW2A0A096LPI5 108 aaPredicted RBP7.8□□□□□ -1.16
SDC3-204ENST00000487984 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.8□□□□□ -1.16
SDC3-204ENST00000487984 NPSP0C0P6 89 aa7.8□□□□□ -1.16
SDC3-204ENST00000487984 ERASQ7Z444 233 aa7.8□□□□□ -1.16
SDC3-204ENST00000487984 OR5A1Q8NGJ0 315 aa7.8□□□□□ -1.16
SDC3-204ENST00000487984 TMEM141Q96I45 108 aa7.8□□□□□ -1.16
SDC3-204ENST00000487984 TMEM101Q96IK0 257 aa7.8□□□□□ -1.16
SDC3-204ENST00000487984 A0A096LNJ9 63 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 XCL1P47992 114 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 AKR1D1P51857 326 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 COX6A2Q02221 97 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 Q6ZN92 141 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 OR10D4PQ8NGN7 298 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 IFI27L1Q96BM0 104 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 TIMM17AQ99595 171 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 PLAC8Q9NZF1 115 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
SDC3-204ENST00000487984 LINC00959A0A1B0GUT2 108 aa7.78□□□□□ -1.16
SDC3-204ENST00000487984 C20orf202A1L168 122 aa7.78□□□□□ -1.16
SDC3-204ENST00000487984 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
SDC3-204ENST00000487984 CCL25O15444 150 aa7.78□□□□□ -1.16
SDC3-204ENST00000487984 SERTAD4-AS1Q5TG53 156 aa7.78□□□□□ -1.16
SDC3-204ENST00000487984 MRPL52Q86TS9 123 aaKnown RBP7.78□□□□□ -1.16
SDC3-204ENST00000487984 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
SDC3-204ENST00000487984 KRTDAPP60985 99 aa7.77□□□□□ -1.17
SDC3-204ENST00000487984 RPL39P62891 51 aaKnown RBP7.77□□□□□ -1.17
SDC3-204ENST00000487984 CDC42SE2Q9NRR3 84 aa7.77□□□□□ -1.17
SDC3-204ENST00000487984 CSDC2Q9Y534 153 aaKnown RBP7.77□□□□□ -1.17
SDC3-204ENST00000487984 IGKV2-24A0A0C4DH68 120 aa7.76□□□□□ -1.17
SDC3-204ENST00000487984 MAJINQ3KP22 176 aa7.76□□□□□ -1.17
SDC3-204ENST00000487984 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
SDC3-204ENST00000487984 IGHV1-58A0A0C4DH39 117 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 C3orf79P0CE67 100 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
SDC3-204ENST00000487984 SS18Q15532 418 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 Q6ZRU5 148 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 ZNF664Q8N3J9 261 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 LINC00526Q96FQ7 95 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 VCX2Q9H322 139 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 UBE2D4Q9Y2X8 147 aa7.75□□□□□ -1.17
SDC3-204ENST00000487984 A0A096LNI7 61 aa7.74□□□□□ -1.17
SDC3-204ENST00000487984 TRAV12-1A0A0B4J245 112 aa7.74□□□□□ -1.17
SDC3-204ENST00000487984 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
SDC3-204ENST00000487984 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
SDC3-204ENST00000487984 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
SDC3-204ENST00000487984 H0Y8G0 127 aa7.73□□□□□ -1.17
SDC3-204ENST00000487984 SCGB1D1O95968 90 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms