RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 ORMDL2Q53FV1 153 aa10.9□□□□□ -0.66
HMG20B-212ENST00000487894 NXT2Q9NPJ8 142 aaKnown RBP10.9□□□□□ -0.66
HMG20B-212ENST00000487894 APOC3P02656 99 aa10.89□□□□□ -0.67
HMG20B-212ENST00000487894 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
HMG20B-212ENST00000487894 COX19Q49B96 90 aa10.89□□□□□ -0.67
HMG20B-212ENST00000487894 C2orf66Q6UXQ4 117 aa10.89□□□□□ -0.67
HMG20B-212ENST00000487894 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
HMG20B-212ENST00000487894 HERC1Q15751 4861 aa10.89□□□□□ -0.67
HMG20B-212ENST00000487894 CHTF8P0CG12 524 aa10.88□□□□□ -0.67
HMG20B-212ENST00000487894 MALP21145 153 aa10.88□□□□□ -0.67
HMG20B-212ENST00000487894 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
HMG20B-212ENST00000487894 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
HMG20B-212ENST00000487894 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
HMG20B-212ENST00000487894 MT-ND6P03923 174 aa10.87□□□□□ -0.67
HMG20B-212ENST00000487894 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
HMG20B-212ENST00000487894 ALKBH7Q9BT30 221 aaPredicted RBP10.87□□□□□ -0.67
HMG20B-212ENST00000487894 MRPL18Q9H0U6 180 aaKnown RBP10.87□□□□□ -0.67
HMG20B-212ENST00000487894 PKHD1L1Q86WI1 4243 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 IGHV3OR16-9A0A0B4J2B5 98 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 SNAPINO95295 136 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 PLA2G1BP04054 148 aaKnown RBP10.86□□□□□ -0.67
HMG20B-212ENST00000487894 COX6A2Q02221 97 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 NDUFA5Q16718 116 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 SVBPQ8N300 66 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 CARD19Q96LW7 228 aa10.86□□□□□ -0.67
HMG20B-212ENST00000487894 IGLV4-69A0A075B6H9 119 aa10.85□□□□□ -0.67
HMG20B-212ENST00000487894 TGIF2-C20orf24A0A0A6YYL0 155 aa10.85□□□□□ -0.67
HMG20B-212ENST00000487894 LINC00173Q6ZV60 143 aa10.85□□□□□ -0.67
HMG20B-212ENST00000487894 IGIPA6NJ69 53 aa10.84□□□□□ -0.67
HMG20B-212ENST00000487894 APOMO95445 188 aa10.84□□□□□ -0.67
HMG20B-212ENST00000487894 KRTAP10-4P60372 401 aaPredicted RBP10.84□□□□□ -0.67
HMG20B-212ENST00000487894 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
HMG20B-212ENST00000487894 TEX43Q6ZNM6 134 aa10.84□□□□□ -0.67
HMG20B-212ENST00000487894 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
HMG20B-212ENST00000487894 NPSP0C0P6 89 aa10.83□□□□□ -0.68
HMG20B-212ENST00000487894 FABP9Q0Z7S8 132 aa10.83□□□□□ -0.68
HMG20B-212ENST00000487894 LINC00242Q5T6M2 205 aa10.83□□□□□ -0.68
HMG20B-212ENST00000487894 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
HMG20B-212ENST00000487894 AMELXQ99217 191 aa10.83□□□□□ -0.68
HMG20B-212ENST00000487894 A0A087WYN8 130 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 A0A096LNI7 61 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 LINC01546A6NGU7 62 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 UBE2D1P51668 147 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 SPAG11BQ08648 103 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 Q6ZN92 141 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 Q6ZRU5 148 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 OR10D4PQ8NGN7 298 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
HMG20B-212ENST00000487894 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
HMG20B-212ENST00000487894 ORAOV1Q8WV07 137 aa10.81□□□□□ -0.68
HMG20B-212ENST00000487894 C2orf48Q96LS8 159 aa10.81□□□□□ -0.68
HMG20B-212ENST00000487894 CAMK2N2Q96S95 79 aa10.81□□□□□ -0.68
HMG20B-212ENST00000487894 TIMM17AQ99595 171 aa10.81□□□□□ -0.68
HMG20B-212ENST00000487894 C2orf88Q9BSF0 95 aa10.81□□□□□ -0.68
HMG20B-212ENST00000487894 G0S2P27469 103 aa10.8□□□□□ -0.68
HMG20B-212ENST00000487894 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
HMG20B-212ENST00000487894 VCX2Q9H322 139 aa10.8□□□□□ -0.68
HMG20B-212ENST00000487894 PLAC8Q9NZF1 115 aa10.8□□□□□ -0.68
HMG20B-212ENST00000487894 A0A087WZ39 114 aa10.79□□□□□ -0.68
HMG20B-212ENST00000487894 MAJINQ3KP22 176 aa10.79□□□□□ -0.68
HMG20B-212ENST00000487894 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
HMG20B-212ENST00000487894 PKIGQ9Y2B9 76 aa10.79□□□□□ -0.68
HMG20B-212ENST00000487894 TRAPPC1Q9Y5R8 145 aa10.79□□□□□ -0.68
HMG20B-212ENST00000487894 FAM19A3Q7Z5A8 133 aa10.78□□□□□ -0.68
HMG20B-212ENST00000487894 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
HMG20B-212ENST00000487894 RPL37AP61513 92 aaKnown RBP10.77□□□□□ -0.69
HMG20B-212ENST00000487894 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.69
HMG20B-212ENST00000487894 FA2HQ7L5A8 372 aa10.77□□□□□ -0.69
HMG20B-212ENST00000487894 ERASQ7Z444 233 aa10.77□□□□□ -0.69
HMG20B-212ENST00000487894 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
HMG20B-212ENST00000487894 STPG4Q8N801 248 aa10.76□□□□□ -0.69
HMG20B-212ENST00000487894 C18orf32Q8TCD1 76 aa10.76□□□□□ -0.69
HMG20B-212ENST00000487894 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
HMG20B-212ENST00000487894 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
HMG20B-212ENST00000487894 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
HMG20B-212ENST00000487894 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
HMG20B-212ENST00000487894 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 F8WDY8 70 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
HMG20B-212ENST00000487894 PTTG1IPP53801 180 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 RNF151Q2KHN1 245 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 SLC7A5P1Q8MH63 180 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 LINC01561Q8N1V8 128 aa10.74□□□□□ -0.69
HMG20B-212ENST00000487894 MRPL35Q9NZE8 188 aaKnown RBP10.74□□□□□ -0.69
HMG20B-212ENST00000487894 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
HMG20B-212ENST00000487894 A0A096LNJ9 63 aa10.73□□□□□ -0.69
HMG20B-212ENST00000487894 NDUFA1O15239 70 aa10.73□□□□□ -0.69
HMG20B-212ENST00000487894 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
HMG20B-212ENST00000487894 FAT3Q8TDW7 4589 aa10.72□□□□□ -0.69
HMG20B-212ENST00000487894 HERVK_113P63121 156 aa10.72□□□□□ -0.69
HMG20B-212ENST00000487894 GAGE2BQ13066 116 aa10.72□□□□□ -0.69
HMG20B-212ENST00000487894 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
HMG20B-212ENST00000487894 CBLN2Q8IUK8 224 aa10.72□□□□□ -0.69
HMG20B-212ENST00000487894 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.69
HMG20B-212ENST00000487894 SEC11AP67812 179 aa10.71□□□□□ -0.69
HMG20B-212ENST00000487894 LRP1Q07954 4544 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms