RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CT83Q5H943 113 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 LINC00242Q5T6M2 205 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.23□□□□□ -1.89
COL4A3-206ENST00000487633 TSKUQ8WUA8 353 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 ISOC2Q96AB3 205 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 OSTCQ9NRP0 149 aa3.23□□□□□ -1.89
COL4A3-206ENST00000487633 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 A0A1B0GUT8 65 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 HIGD1CA8MV81 97 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 F8W036 122 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 ZNF561-AS1K7EIQ3 104 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 M0QXV9 152 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 MT-ND4LP03901 98 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 CTRLP40313 264 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 TMEM97Q5BJF2 176 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 SUMO4Q6EEV6 95 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 UQCC3Q6UW78 93 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 C3orf22Q8N5N4 141 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 LINC00337Q8N6G1 96 aa3.22□□□□□ -1.89
COL4A3-206ENST00000487633 TMEM218A2RU14 115 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 PPP1R2P9O14990 202 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 UBE2BP63146 152 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 PNRC1Q12796 327 aaPredicted RBP3.21□□□□□ -1.9
COL4A3-206ENST00000487633 RIGQ13278 110 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 GAGE2EQ4V326 116 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 C9orf129Q5T035 196 aaKnown RBP3.21□□□□□ -1.9
COL4A3-206ENST00000487633 XP32Q5T750 250 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 CAMK2N2Q96S95 79 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 CTDSP1Q9GZU7 261 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 GAGE2DQ9UEU5 116 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 NAT8BQ9UHF3 227 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 V9GYV3 84 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
COL4A3-206ENST00000487633 UBE2L6O14933 153 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 APOC3P02656 99 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 S100A8P05109 93 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 FOXA3P55318 350 aaPredicted RBP3.2□□□□□ -1.9
COL4A3-206ENST00000487633 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 C10orf91Q5T1B1 145 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 RNASEKQ6P5S7 137 aaKnown RBP3.2□□□□□ -1.9
COL4A3-206ENST00000487633 RASL11AQ6T310 242 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 CNFNQ9BYD5 112 aa3.2□□□□□ -1.9
COL4A3-206ENST00000487633 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 A0A1B0GW15 77 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 SMIM27A0A1W2PRY6 76 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 MRPL54Q6P161 138 aaKnown RBP3.19□□□□□ -1.9
COL4A3-206ENST00000487633 ANAPC16Q96DE5 110 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 SEC11CQ9BY50 192 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 TMEM191AQ9H0A3 160 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 NIT2Q9NQR4 276 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 C6orf48Q9UBA6 75 aa3.19□□□□□ -1.9
COL4A3-206ENST00000487633 TMA7Q9Y2S6 64 aaKnown RBP3.19□□□□□ -1.9
COL4A3-206ENST00000487633 PPP1R17O96001 155 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 S100PP25815 95 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 CKS2P33552 79 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 HBBP68871 147 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 RNASE13Q5GAN3 156 aaKnown RBP3.18□□□□□ -1.9
COL4A3-206ENST00000487633 CD164L2Q6UWJ8 174 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 AMN1Q8IY45 258 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 GATD1Q8NB37 220 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 RPL39LQ96EH5 51 aaKnown RBP3.18□□□□□ -1.9
COL4A3-206ENST00000487633 ST20Q9HBF5 79 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 PKIGQ9Y2B9 76 aa3.18□□□□□ -1.9
COL4A3-206ENST00000487633 SDHAF1A6NFY7 115 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 SMKR1H3BMG3 65 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 NCR2O95944 276 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 RAB4AP20338 218 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 PMCHP20382 165 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 COTL1Q14019 142 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 FAM104BQ5XKR9 115 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 ATP5L2Q7Z4Y8 100 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 CBLN2Q8IUK8 224 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 MRAP2Q96G30 205 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 BTF3L4Q96K17 158 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 RPS10P5Q9NQ39 176 aa3.17□□□□□ -1.9
COL4A3-206ENST00000487633 C7orf77A4D0Y5 90 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 I3L3M4 83 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 VCYO14598 125 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 SNAPINO95295 136 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 APCSP02743 223 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 ESDP10768 282 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 FCER1GP30273 86 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 RHEBQ15382 184 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 MRPL51Q4U2R6 128 aaKnown RBP3.16□□□□□ -1.9
COL4A3-206ENST00000487633 AMMECR1LQ6DCA0 310 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 FP248Q71RG6 208 aaPredicted RBP3.16□□□□□ -1.9
COL4A3-206ENST00000487633 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 SVBPQ8N300 66 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 C2orf48Q96LS8 159 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 IMMP2LQ96T52 175 aa3.16□□□□□ -1.9
COL4A3-206ENST00000487633 TRBV6-5A0A0K0K1A5 114 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 A0A1B0GXF2 115 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 D6R8Y8 96 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 PPBPP02775 128 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 TLX1NBP0CAT3 122 aa3.15□□□□□ -1.91
COL4A3-206ENST00000487633 SUMO2P61956 95 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms