RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NOTCH1P46531 2555 aa8.89□□□□□ -0.99
HSPG2-211ENST00000486901 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
HSPG2-211ENST00000486901 RNASE1P07998 156 aaKnown RBP8.89□□□□□ -0.99
HSPG2-211ENST00000486901 YAE1D1Q9NRH1 226 aa8.89□□□□□ -0.99
HSPG2-211ENST00000486901 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
HSPG2-211ENST00000486901 OR13C6PQ8NH95 151 aa8.88□□□□□ -0.99
HSPG2-211ENST00000486901 CLPSL2Q6UWE3 100 aa8.88□□□□□ -0.99
HSPG2-211ENST00000486901 SDIM1Q6ZPB5 146 aa8.88□□□□□ -0.99
HSPG2-211ENST00000486901 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
HSPG2-211ENST00000486901 LINC00158P58513 81 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 PPDPFQ9H3Y8 114 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 MAP6D1Q9H9H5 199 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
HSPG2-211ENST00000486901 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 TIRAPP58753 221 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 C5orf38Q86SI9 138 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
HSPG2-211ENST00000486901 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
HSPG2-211ENST00000486901 C9orf153Q5TBE3 101 aa8.86□□□□□ -0.99
HSPG2-211ENST00000486901 A0A087WVE0 104 aa8.86□□□□□ -0.99
HSPG2-211ENST00000486901 A0A096LPF7 62 aa8.86□□□□□ -0.99
HSPG2-211ENST00000486901 NDUFA1O15239 70 aa8.86□□□□□ -0.99
HSPG2-211ENST00000486901 EDA2RQ9HAV5 297 aa8.86□□□□□ -0.99
HSPG2-211ENST00000486901 COX7A2LO14548 114 aa8.85□□□□□ -0.99
HSPG2-211ENST00000486901 C11orf72Q8NBR9 251 aa8.85□□□□□ -0.99
HSPG2-211ENST00000486901 A0A087WYN8 130 aa8.84□□□□□ -0.99
HSPG2-211ENST00000486901 UBE2L6O14933 153 aa8.84□□□□□ -0.99
HSPG2-211ENST00000486901 BRI3O95415 125 aa8.84□□□□□ -0.99
HSPG2-211ENST00000486901 TRGV2A0A075B6R0 118 aa8.84□□□□□ -0.99
HSPG2-211ENST00000486901 WFDC11Q8NEX6 87 aa8.84□□□□□ -0.99
HSPG2-211ENST00000486901 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
HSPG2-211ENST00000486901 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 ZNF702PQ9H963 129 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 TMEM89A2RUT3 159 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 STHQ8IWL8 128 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 PRORYQ9H606 182 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 UNC79Q9P2D8 2635 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 NCR3O14931 201 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 INSP01308 110 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 WFDC9Q8NEX5 89 aa8.83□□□□□ -1
HSPG2-211ENST00000486901 HERVK_113P63121 156 aa8.82□□□□□ -1
HSPG2-211ENST00000486901 LINC01356Q8N9X3 169 aa8.82□□□□□ -1
HSPG2-211ENST00000486901 PAX4O43316 350 aa8.82□□□□□ -1
HSPG2-211ENST00000486901 VPREB3Q9UKI3 123 aa8.82□□□□□ -1
HSPG2-211ENST00000486901 RPL36AP83881 106 aaKnown RBP8.82□□□□□ -1
HSPG2-211ENST00000486901 RPL36ALQ969Q0 106 aaKnown RBP8.82□□□□□ -1
HSPG2-211ENST00000486901 DNAL4O96015 105 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 CRPP02741 224 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 LECT2O14960 151 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 C1orf158Q8N1D5 194 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 M0QXV9 152 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 Q6Q795 121 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 SMR3AQ99954 134 aa8.81□□□□□ -1
HSPG2-211ENST00000486901 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
HSPG2-211ENST00000486901 ODF3L2Q3SX64 289 aa8.8□□□□□ -1
HSPG2-211ENST00000486901 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
HSPG2-211ENST00000486901 C22orf24Q9Y442 160 aa8.8□□□□□ -1
HSPG2-211ENST00000486901 hADV29S1A0JD25 119 aa8.79□□□□□ -1
HSPG2-211ENST00000486901 SMIM11BQ8TCY0 68 aa8.79□□□□□ -1
HSPG2-211ENST00000486901 ESM1Q9NQ30 184 aa8.79□□□□□ -1
HSPG2-211ENST00000486901 VWFP04275 2813 aa8.79□□□□□ -1
HSPG2-211ENST00000486901 DEFB130BP0DP73 79 aa8.79□□□□□ -1
HSPG2-211ENST00000486901 DEFB130AP0DP74 79 aa8.79□□□□□ -1
HSPG2-211ENST00000486901 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 HTN3P15516 51 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 DEFB114Q30KQ6 69 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 IGLV5-39A0A0G2JS06 123 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 K7EQD1 137 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 MALP21145 153 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 XCL1P47992 114 aa8.78□□□□□ -1
HSPG2-211ENST00000486901 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
HSPG2-211ENST00000486901 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1
HSPG2-211ENST00000486901 IGKV2D-28P01615 120 aa8.77□□□□□ -1
HSPG2-211ENST00000486901 STAB1Q9NY15 2570 aa8.77□□□□□ -1.01
HSPG2-211ENST00000486901 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
HSPG2-211ENST00000486901 F5H768 121 aa8.76□□□□□ -1.01
HSPG2-211ENST00000486901 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
HSPG2-211ENST00000486901 COL6A5A8TX70 2615 aa8.76□□□□□ -1.01
HSPG2-211ENST00000486901 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
HSPG2-211ENST00000486901 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
HSPG2-211ENST00000486901 IGLV10-54A0A075B6I4 117 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 CCL18P55774 89 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 BEAN1Q3B7T3 259 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 COX7B2Q8TF08 81 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 LINC00846Q9NV44 126 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 PEMTQ9UBM1 199 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 CR1P17927 2039 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 TIMM17BO60830 172 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 FAM110AQ9BQ89 295 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 HIVEP1P15822 2718 aa8.75□□□□□ -1.01
HSPG2-211ENST00000486901 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
HSPG2-211ENST00000486901 FAM240AA0A1B0GVK7 77 aa8.74□□□□□ -1.01
HSPG2-211ENST00000486901 DEFB4AO15263 64 aa8.74□□□□□ -1.01
HSPG2-211ENST00000486901 A0A1B0GX51 115 aa8.74□□□□□ -1.01
HSPG2-211ENST00000486901 HILS1P60008 231 aa8.74□□□□□ -1.01
HSPG2-211ENST00000486901 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
HSPG2-211ENST00000486901 A8MTW9 85 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms