RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
CCDC171-208ENST00000486641 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.2
CCDC171-208ENST00000486641 ORMDL1Q9P0S3 153 aa7.52□□□□□ -1.2
CCDC171-208ENST00000486641 IGHV4-61A0A0C4DH41 118 aa7.52□□□□□ -1.21
CCDC171-208ENST00000486641 ENHOQ6UWT2 76 aa7.51□□□□□ -1.21
CCDC171-208ENST00000486641 C20orf197Q8N268 126 aa7.51□□□□□ -1.21
CCDC171-208ENST00000486641 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
CCDC171-208ENST00000486641 PAX4O43316 350 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 PFN2P35080 140 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 CSMD2Q7Z408 3487 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 SPTA1P02549 2419 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 XCL1P47992 114 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 MRAPQ8TCY5 172 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
CCDC171-208ENST00000486641 LYPD5Q6UWN5 251 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 K7EQD1 137 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 AVPP01185 164 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
CCDC171-208ENST00000486641 UBE2L6O14933 153 aa7.48□□□□□ -1.21
CCDC171-208ENST00000486641 ATP5EP2Q5VTU8 51 aa7.48□□□□□ -1.21
CCDC171-208ENST00000486641 TRBV6-4A0A1B0GX49 114 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 IBA57-AS1B1ANH7 110 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 EPM2AB3EWF7 344 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 IGHV4-59P01825 116 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 RIF1Q5UIP0 2472 aaKnown RBP7.47□□□□□ -1.21
CCDC171-208ENST00000486641 MUC6Q6W4X9 2439 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 JMJD7-PLA2G4BH0Y9G9 81 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 INSP01308 110 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 SLURP1P55000 103 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
CCDC171-208ENST00000486641 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.21
CCDC171-208ENST00000486641 H7BZZ5 65 aa7.46□□□□□ -1.21
CCDC171-208ENST00000486641 LY6G6DO95868 133 aa7.46□□□□□ -1.21
CCDC171-208ENST00000486641 LINC00336Q6ZUF6 198 aa7.46□□□□□ -1.21
CCDC171-208ENST00000486641 MAP6D1Q9H9H5 199 aa7.46□□□□□ -1.21
CCDC171-208ENST00000486641 MAP1AP78559 2803 aaPredicted RBP7.46□□□□□ -1.21
CCDC171-208ENST00000486641 ZFHX2Q9C0A1 2572 aaPredicted RBP7.46□□□□□ -1.22
CCDC171-208ENST00000486641 DEFB136Q30KP8 78 aa7.46□□□□□ -1.22
CCDC171-208ENST00000486641 SERP1Q9Y6X1 66 aa7.46□□□□□ -1.22
CCDC171-208ENST00000486641 Q6ZTI0 123 aa7.45□□□□□ -1.22
CCDC171-208ENST00000486641 C18orf65Q6ZTR6 163 aa7.45□□□□□ -1.22
CCDC171-208ENST00000486641 Q8N814 137 aa7.45□□□□□ -1.22
CCDC171-208ENST00000486641 UBE2E2Q96LR5 201 aa7.45□□□□□ -1.22
CCDC171-208ENST00000486641 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
CCDC171-208ENST00000486641 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
CCDC171-208ENST00000486641 CREBBPQ92793 2442 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 TMEM256-PLSCR3K7ERE1 68 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 DEFB112Q30KQ8 113 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 IL17DQ8TAD2 202 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 UBL5Q9BZL1 73 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 A0A096LNT2 108 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 UCNP55089 124 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
CCDC171-208ENST00000486641 C1orf158Q8N1D5 194 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 PRO0628Q9UI54 55 aa7.44□□□□□ -1.22
CCDC171-208ENST00000486641 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
CCDC171-208ENST00000486641 MSMBP08118 114 aa7.43□□□□□ -1.22
CCDC171-208ENST00000486641 NANOS2P60321 138 aaKnown RBP7.43□□□□□ -1.22
CCDC171-208ENST00000486641 C11orf68Q9H3H3 251 aaKnown RBP7.43□□□□□ -1.22
CCDC171-208ENST00000486641 TRAV7A0A075B6U4 112 aa7.43□□□□□ -1.22
CCDC171-208ENST00000486641 C19orf84I3L1E1 186 aa7.43□□□□□ -1.22
CCDC171-208ENST00000486641 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
CCDC171-208ENST00000486641 A0A087WZ39 114 aa7.42□□□□□ -1.22
CCDC171-208ENST00000486641 CEP295Q9C0D2 2601 aa7.42□□□□□ -1.22
CCDC171-208ENST00000486641 IGHV4-30-2A0A087WSY4 118 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 ATRXP46100 2492 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 CSPG4Q6UVK1 2322 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 TRAV10A0A0B4J240 114 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 C16orf95Q9H693 158 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
CCDC171-208ENST00000486641 FP248Q71RG6 208 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-208ENST00000486641 RMI2Q96E14 147 aa7.4□□□□□ -1.22
CCDC171-208ENST00000486641 KLKP1Q107X0 134 aa7.4□□□□□ -1.23
CCDC171-208ENST00000486641 CUBNO60494 3623 aa7.4□□□□□ -1.23
CCDC171-208ENST00000486641 C2CD3Q4AC94 2353 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 M0R2N4 97 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 BCE1O60756 84 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
CCDC171-208ENST00000486641 HIVEP3Q5T1R4 2406 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 J3QLI3 93 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 Q6ZQT0 140 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 TMEM86BQ8N661 226 aa7.39□□□□□ -1.23
CCDC171-208ENST00000486641 LINC01547P58512 204 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-208ENST00000486641 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
CCDC171-208ENST00000486641 DYNLRB2Q8TF09 96 aa7.38□□□□□ -1.23
CCDC171-208ENST00000486641 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
CCDC171-208ENST00000486641 F8WEM9 126 aa7.38□□□□□ -1.23
CCDC171-208ENST00000486641 LINC00482Q8N8I6 264 aa7.38□□□□□ -1.23
CCDC171-208ENST00000486641 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
CCDC171-208ENST00000486641 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
CCDC171-208ENST00000486641 HAMPP81172 84 aa7.37□□□□□ -1.23
CCDC171-208ENST00000486641 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
CCDC171-208ENST00000486641 STHQ8IWL8 128 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms