RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 TRAV9-1A0A075B6T8 112 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 IFITM10A6NMD0 228 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 SLPIP03973 132 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 RHEBQ15382 184 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 C2orf66Q6UXQ4 117 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 SLC7A5P1Q8MH63 180 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 C9orf163Q8N9P6 203 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 SPANXA1Q9NS26 97 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 LAMTOR2Q9Y2Q5 125 aa4.32□□□□□ -1.72
PRDM1-206ENST00000481163 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
PRDM1-206ENST00000481163 IGHV1-58A0A0C4DH39 117 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 IGKV2-24A0A0C4DH68 120 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 PRSS47A8MTI9 375 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 COX7A2LO14548 114 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 SNAPINO95295 136 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 CHTF8P0CG12 524 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 COX6A2Q02221 97 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 ORMDL2Q53FV1 153 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 SVBPQ8N300 66 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 CHAC1Q9BUX1 264 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 NXT2Q9NPJ8 142 aaKnown RBP4.31□□□□□ -1.72
PRDM1-206ENST00000481163 CYSLTR1Q9Y271 337 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
PRDM1-206ENST00000481163 TRAPPC1Q9Y5R8 145 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.31□□□□□ -1.72
PRDM1-206ENST00000481163 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
PRDM1-206ENST00000481163 IGLV4-69A0A075B6H9 119 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 IGLV4-3A0A075B6K6 122 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 PANO1I0J062 215 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 CNBPP62633 177 aaKnown RBP4.3□□□□□ -1.72
PRDM1-206ENST00000481163 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 Q6ZN92 141 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 TEX43Q6ZNM6 134 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 SDIM1Q6ZPB5 146 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 Q6ZSA8 131 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 FAM104AQ969W3 186 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
PRDM1-206ENST00000481163 VCX2Q9H322 139 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 SMCO4Q9NRQ5 59 aa4.3□□□□□ -1.72
PRDM1-206ENST00000481163 GVQW2A0A096LPI5 108 aaPredicted RBP4.29□□□□□ -1.72
PRDM1-206ENST00000481163 A0A0J9YXV3 536 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 H3BS24 57 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 APOMO95445 188 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
PRDM1-206ENST00000481163 SYCNQ0VAF6 134 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 COX19Q49B96 90 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 ORAOV1Q8WV07 137 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 SCGB3A1Q96QR1 104 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 CAMK2N2Q96S95 79 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
PRDM1-206ENST00000481163 MT-ND6P03923 174 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 PLA2G1BP04054 148 aaKnown RBP4.28□□□□□ -1.72
PRDM1-206ENST00000481163 NDUFA6P56556 154 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 SPAG11BQ08648 103 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 Q6ZRU5 148 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
PRDM1-206ENST00000481163 A0A087WYN8 130 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 A0A096LNI7 61 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 G0S2P27469 103 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 RPL18AQ02543 176 aaKnown RBP4.27□□□□□ -1.73
PRDM1-206ENST00000481163 PMCHL1Q16048 86 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 LINC00242Q5T6M2 205 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 CBLN2Q8IUK8 224 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 STPG4Q8N801 248 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 TOMM6Q96B49 74 aa4.27□□□□□ -1.73
PRDM1-206ENST00000481163 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 IGHV3OR16-9A0A0B4J2B5 98 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 IGIPA6NJ69 53 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 K7EMI3 77 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 UBE2D1P51668 147 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 RPL37AP61513 92 aaKnown RBP4.26□□□□□ -1.73
PRDM1-206ENST00000481163 UNQ6190/PRO20217Q6UXQ8 127 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 LINC00173Q6ZV60 143 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 AMELXQ99217 191 aa4.26□□□□□ -1.73
PRDM1-206ENST00000481163 GEMIN7Q9H840 131 aaKnown RBP4.26□□□□□ -1.73
PRDM1-206ENST00000481163 SRRM2Q9UQ35 2752 aaKnown RBP4.25□□□□□ -1.73
PRDM1-206ENST00000481163 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 NDUFA1O15239 70 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 PRSS2P07478 247 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 LINC00614P0C842 121 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 PAPPA-AS1Q5QFB9 102 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 C10orf25Q5T742 122 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 ERASQ7Z444 233 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 OR10D4PQ8NGN7 298 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
PRDM1-206ENST00000481163 PACRGQ96M98 296 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms