RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.89
TDP2-205ENST00000480495 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.9
TDP2-205ENST00000480495 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
TDP2-205ENST00000480495 Q6ZRU5 148 aa9.46□□□□□ -0.9
TDP2-205ENST00000480495 OR10D4PQ8NGN7 298 aa9.46□□□□□ -0.9
TDP2-205ENST00000480495 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
TDP2-205ENST00000480495 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.9
TDP2-205ENST00000480495 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
TDP2-205ENST00000480495 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
TDP2-205ENST00000480495 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
TDP2-205ENST00000480495 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
TDP2-205ENST00000480495 Q8N8P6 123 aa9.45□□□□□ -0.9
TDP2-205ENST00000480495 F8WDY8 70 aa9.44□□□□□ -0.9
TDP2-205ENST00000480495 IFITM2Q01629 132 aa9.44□□□□□ -0.9
TDP2-205ENST00000480495 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
TDP2-205ENST00000480495 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
TDP2-205ENST00000480495 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 IGLV4-3A0A075B6K6 122 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 K7EMI3 77 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 ADCYAP1P18509 176 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 PTTG1IPP53801 180 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 RNF151Q2KHN1 245 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 ORMDL2Q53FV1 153 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 CYSLTR1Q9Y271 337 aa9.43□□□□□ -0.9
TDP2-205ENST00000480495 TRAV9-1A0A075B6T8 112 aa9.42□□□□□ -0.9
TDP2-205ENST00000480495 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
TDP2-205ENST00000480495 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
TDP2-205ENST00000480495 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
TDP2-205ENST00000480495 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
TDP2-205ENST00000480495 TEX43Q6ZNM6 134 aa9.41□□□□□ -0.9
TDP2-205ENST00000480495 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
TDP2-205ENST00000480495 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
TDP2-205ENST00000480495 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
TDP2-205ENST00000480495 NPSP0C0P6 89 aa9.4□□□□□ -0.9
TDP2-205ENST00000480495 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
TDP2-205ENST00000480495 Q6ZN92 141 aa9.4□□□□□ -0.9
TDP2-205ENST00000480495 C2orf88Q9BSF0 95 aa9.4□□□□□ -0.9
TDP2-205ENST00000480495 MRPL35Q9NZE8 188 aaKnown RBP9.4□□□□□ -0.9
TDP2-205ENST00000480495 A0A087WZ39 114 aa9.39□□□□□ -0.91
TDP2-205ENST00000480495 NDUFA1O15239 70 aa9.39□□□□□ -0.91
TDP2-205ENST00000480495 G0S2P27469 103 aa9.39□□□□□ -0.91
TDP2-205ENST00000480495 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
TDP2-205ENST00000480495 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
TDP2-205ENST00000480495 S100PP25815 95 aa9.38□□□□□ -0.91
TDP2-205ENST00000480495 UBE2D1P51668 147 aa9.38□□□□□ -0.91
TDP2-205ENST00000480495 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
TDP2-205ENST00000480495 VCX2Q9H322 139 aa9.38□□□□□ -0.91
TDP2-205ENST00000480495 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
TDP2-205ENST00000480495 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
TDP2-205ENST00000480495 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
TDP2-205ENST00000480495 AMELXQ99217 191 aa9.37□□□□□ -0.91
TDP2-205ENST00000480495 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
TDP2-205ENST00000480495 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
TDP2-205ENST00000480495 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
TDP2-205ENST00000480495 Q6ZRP5 223 aa9.36□□□□□ -0.91
TDP2-205ENST00000480495 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 TLX1NBP0CAT3 122 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 COX19Q49B96 90 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
TDP2-205ENST00000480495 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 GNB1LQ9BYB4 327 aa9.35□□□□□ -0.91
TDP2-205ENST00000480495 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
TDP2-205ENST00000480495 C10orf25Q5T742 122 aa9.34□□□□□ -0.91
TDP2-205ENST00000480495 FAM19A3Q7Z5A8 133 aa9.34□□□□□ -0.91
TDP2-205ENST00000480495 TIMM17AQ99595 171 aa9.34□□□□□ -0.91
TDP2-205ENST00000480495 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
TDP2-205ENST00000480495 SEC11AP67812 179 aa9.33□□□□□ -0.92
TDP2-205ENST00000480495 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
TDP2-205ENST00000480495 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
TDP2-205ENST00000480495 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
TDP2-205ENST00000480495 TRBV30A0A0K0K1B3 111 aa9.32□□□□□ -0.92
TDP2-205ENST00000480495 LINC01549A6NIU2 74 aa9.32□□□□□ -0.92
TDP2-205ENST00000480495 RHEBQ15382 184 aa9.32□□□□□ -0.92
TDP2-205ENST00000480495 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
TDP2-205ENST00000480495 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
TDP2-205ENST00000480495 MT-ND6P03923 174 aa9.31□□□□□ -0.92
TDP2-205ENST00000480495 HERVK_113P63121 156 aa9.31□□□□□ -0.92
TDP2-205ENST00000480495 ERASQ7Z444 233 aa9.31□□□□□ -0.92
TDP2-205ENST00000480495 ALKBH7Q9BT30 221 aaPredicted RBP9.31□□□□□ -0.92
TDP2-205ENST00000480495 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
TDP2-205ENST00000480495 PRSS2P07478 247 aa9.3□□□□□ -0.92
TDP2-205ENST00000480495 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
TDP2-205ENST00000480495 PACRGQ96M98 296 aaPredicted RBP9.3□□□□□ -0.92
TDP2-205ENST00000480495 SCGB3A1Q96QR1 104 aa9.3□□□□□ -0.92
TDP2-205ENST00000480495 RPS10P5Q9NQ39 176 aa9.3□□□□□ -0.92
TDP2-205ENST00000480495 REG3GQ6UW15 175 aa9.29□□□□□ -0.92
TDP2-205ENST00000480495 C2orf82Q6UX34 121 aa9.29□□□□□ -0.92
TDP2-205ENST00000480495 GEMIN7Q9H840 131 aaKnown RBP9.29□□□□□ -0.92
TDP2-205ENST00000480495 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
TDP2-205ENST00000480495 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
TDP2-205ENST00000480495 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
TDP2-205ENST00000480495 Q8IZM0 81 aa9.28□□□□□ -0.92
TDP2-205ENST00000480495 LINC01600Q96MT4 127 aa9.28□□□□□ -0.92
TDP2-205ENST00000480495 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
TDP2-205ENST00000480495 CKS1BP61024 79 aa9.27□□□□□ -0.93
TDP2-205ENST00000480495 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
TDP2-205ENST00000480495 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms