RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
SMARCAL1-211ENST00000479008 Q6ZRN7 208 aaPredicted RBP9.08□□□□□ -0.96
SMARCAL1-211ENST00000479008 SPATA12Q7Z6I5 190 aa9.08□□□□□ -0.96
SMARCAL1-211ENST00000479008 GEMIN7Q9H840 131 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-211ENST00000479008 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
SMARCAL1-211ENST00000479008 COX11Q9Y6N1 276 aa9.08□□□□□ -0.96
SMARCAL1-211ENST00000479008 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 IGLC3P0DOY3 106 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 HERVK_113P63121 156 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 FOXI1Q12951 378 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 OR10D4PQ8NGN7 298 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
SMARCAL1-211ENST00000479008 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
SMARCAL1-211ENST00000479008 C5orf38Q86SI9 138 aa9.06□□□□□ -0.96
SMARCAL1-211ENST00000479008 DNAH2Q9P225 4427 aa9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 KMT2CQ8NEZ4 4911 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 IGHV3OR16-9A0A0B4J2B5 98 aa9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 COX7A2LO14548 114 aa9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 LINC01545Q5VT33 79 aa9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 MAPKAPK5-AS1Q8N8E1 139 aa9.05□□□□□ -0.96
SMARCAL1-211ENST00000479008 RYR2Q92736 4967 aa9.04□□□□□ -0.96
SMARCAL1-211ENST00000479008 C20orf202A1L168 122 aa9.04□□□□□ -0.96
SMARCAL1-211ENST00000479008 DPM2O94777 84 aa9.04□□□□□ -0.96
SMARCAL1-211ENST00000479008 CDKN2A-AS1Q9UH64 79 aa9.04□□□□□ -0.96
SMARCAL1-211ENST00000479008 IGLV5-45A0A087WSX0 123 aa9.03□□□□□ -0.96
SMARCAL1-211ENST00000479008 RTL8CO15255 209 aa9.03□□□□□ -0.96
SMARCAL1-211ENST00000479008 IGKCP01834 107 aa9.03□□□□□ -0.96
SMARCAL1-211ENST00000479008 ZNF22P17026 224 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-211ENST00000479008 MALP21145 153 aa9.03□□□□□ -0.96
SMARCAL1-211ENST00000479008 A0A087WZ39 114 aa9.02□□□□□ -0.97
SMARCAL1-211ENST00000479008 PLNP26678 52 aa9.02□□□□□ -0.97
SMARCAL1-211ENST00000479008 TMEM170BQ5T4T1 132 aa9.02□□□□□ -0.97
SMARCAL1-211ENST00000479008 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
SMARCAL1-211ENST00000479008 USP17L23D6RBM5 183 aa9.01□□□□□ -0.97
SMARCAL1-211ENST00000479008 H3BRM9 83 aa9.01□□□□□ -0.97
SMARCAL1-211ENST00000479008 LECT2O14960 151 aa9.01□□□□□ -0.97
SMARCAL1-211ENST00000479008 FRAS1Q86XX4 4008 aa9.01□□□□□ -0.97
SMARCAL1-211ENST00000479008 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
SMARCAL1-211ENST00000479008 APOMO95445 188 aa9□□□□□ -0.97
SMARCAL1-211ENST00000479008 SPINK8P0C7L1 97 aa9□□□□□ -0.97
SMARCAL1-211ENST00000479008 WFDC2Q14508 124 aa9□□□□□ -0.97
SMARCAL1-211ENST00000479008 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
SMARCAL1-211ENST00000479008 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
SMARCAL1-211ENST00000479008 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
SMARCAL1-211ENST00000479008 TNP2Q05952 138 aa8.99□□□□□ -0.97
SMARCAL1-211ENST00000479008 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
SMARCAL1-211ENST00000479008 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
SMARCAL1-211ENST00000479008 ORAOV1Q8WV07 137 aa8.99□□□□□ -0.97
SMARCAL1-211ENST00000479008 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 A0A087WTM6 91 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 TMEM223A0PJW6 202 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 SMIM1B2RUZ4 78 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 AKR1D1P51857 326 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 HIGD2BQ4VC39 106 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 ATOH7Q8N100 152 aa8.98□□□□□ -0.97
SMARCAL1-211ENST00000479008 GVQW2A0A096LPI5 108 aaPredicted RBP8.96□□□□□ -0.98
SMARCAL1-211ENST00000479008 HERVK_113P61574 105 aa8.96□□□□□ -0.98
SMARCAL1-211ENST00000479008 SPAG11BQ08648 103 aa8.96□□□□□ -0.98
SMARCAL1-211ENST00000479008 C14orf177Q52M58 125 aa8.96□□□□□ -0.98
SMARCAL1-211ENST00000479008 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
SMARCAL1-211ENST00000479008 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
SMARCAL1-211ENST00000479008 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
SMARCAL1-211ENST00000479008 LINC00336Q6ZUF6 198 aa8.95□□□□□ -0.98
SMARCAL1-211ENST00000479008 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
SMARCAL1-211ENST00000479008 IGLV5-39A0A0G2JS06 123 aa8.94□□□□□ -0.98
SMARCAL1-211ENST00000479008 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
SMARCAL1-211ENST00000479008 EREGO14944 169 aa8.94□□□□□ -0.98
SMARCAL1-211ENST00000479008 PRSS2P07478 247 aa8.94□□□□□ -0.98
SMARCAL1-211ENST00000479008 STPG4Q8N801 248 aa8.94□□□□□ -0.98
SMARCAL1-211ENST00000479008 Q8N814 137 aa8.94□□□□□ -0.98
SMARCAL1-211ENST00000479008 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
SMARCAL1-211ENST00000479008 LOC105371267A0A1B0GV96 52 aa8.93□□□□□ -0.98
SMARCAL1-211ENST00000479008 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
SMARCAL1-211ENST00000479008 Q8IZM0 81 aa8.93□□□□□ -0.98
SMARCAL1-211ENST00000479008 COX7B2Q8TF08 81 aa8.93□□□□□ -0.98
SMARCAL1-211ENST00000479008 PYY3Q5JQD4 70 aa8.92□□□□□ -0.98
SMARCAL1-211ENST00000479008 RYR3Q15413 4870 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 FAT2Q9NYQ8 4349 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 E9PLD3 99 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 LEPROTO15243 131 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 MAJINQ3KP22 176 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-211ENST00000479008 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
SMARCAL1-211ENST00000479008 CKS1BP61024 79 aa8.9□□□□□ -0.98
SMARCAL1-211ENST00000479008 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
SMARCAL1-211ENST00000479008 PLEKHB2Q96CS7 222 aa8.9□□□□□ -0.98
SMARCAL1-211ENST00000479008 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
SMARCAL1-211ENST00000479008 CAMK2N2Q96S95 79 aa8.9□□□□□ -0.98
SMARCAL1-211ENST00000479008 SLPIP03973 132 aa8.89□□□□□ -0.99
SMARCAL1-211ENST00000479008 TSPEAR-AS2P59090 65 aa8.89□□□□□ -0.99
SMARCAL1-211ENST00000479008 DNAH11Q96DT5 4516 aa8.89□□□□□ -0.99
SMARCAL1-211ENST00000479008 IGKV2D-26A0A0A0MRZ7 120 aa8.88□□□□□ -0.99
SMARCAL1-211ENST00000479008 J3QQQ9 107 aa8.88□□□□□ -0.99
SMARCAL1-211ENST00000479008 NDUFA1O15239 70 aa8.88□□□□□ -0.99
SMARCAL1-211ENST00000479008 LGALS3P17931 250 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms