RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
HDAC7-222ENST00000477937 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
HDAC7-222ENST00000477937 IFITM2Q01629 132 aa8.69□□□□□ -1.02
HDAC7-222ENST00000477937 Q6ZRU5 148 aa8.69□□□□□ -1.02
HDAC7-222ENST00000477937 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
HDAC7-222ENST00000477937 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
HDAC7-222ENST00000477937 TMEM218A2RU14 115 aa8.68□□□□□ -1.02
HDAC7-222ENST00000477937 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
HDAC7-222ENST00000477937 Q8N8P6 123 aa8.68□□□□□ -1.02
HDAC7-222ENST00000477937 OR10D4PQ8NGN7 298 aa8.68□□□□□ -1.02
HDAC7-222ENST00000477937 CTDSP1Q9GZU7 261 aa8.68□□□□□ -1.02
HDAC7-222ENST00000477937 ADCYAP1P18509 176 aa8.67□□□□□ -1.02
HDAC7-222ENST00000477937 PTTG1IPP53801 180 aa8.67□□□□□ -1.02
HDAC7-222ENST00000477937 GAGE2BQ13066 116 aa8.67□□□□□ -1.02
HDAC7-222ENST00000477937 TMEM141Q96I45 108 aa8.67□□□□□ -1.02
HDAC7-222ENST00000477937 HERC1Q15751 4861 aa8.67□□□□□ -1.02
HDAC7-222ENST00000477937 IGLV4-3A0A075B6K6 122 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 TGIF2-C20orf24A0A0A6YYL0 155 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 F8WDY8 70 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 K7EMI3 77 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 RNF151Q2KHN1 245 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 ORMDL2Q53FV1 153 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
HDAC7-222ENST00000477937 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
HDAC7-222ENST00000477937 TEX43Q6ZNM6 134 aa8.65□□□□□ -1.02
HDAC7-222ENST00000477937 NXT2Q9NPJ8 142 aaKnown RBP8.65□□□□□ -1.02
HDAC7-222ENST00000477937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
HDAC7-222ENST00000477937 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
HDAC7-222ENST00000477937 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
HDAC7-222ENST00000477937 Q6ZN92 141 aa8.64□□□□□ -1.03
HDAC7-222ENST00000477937 C2orf88Q9BSF0 95 aa8.64□□□□□ -1.03
HDAC7-222ENST00000477937 SEC11CQ9BY50 192 aa8.64□□□□□ -1.03
HDAC7-222ENST00000477937 A0A087WZ39 114 aa8.63□□□□□ -1.03
HDAC7-222ENST00000477937 NDUFA1O15239 70 aa8.63□□□□□ -1.03
HDAC7-222ENST00000477937 S100PP25815 95 aa8.63□□□□□ -1.03
HDAC7-222ENST00000477937 G0S2P27469 103 aa8.63□□□□□ -1.03
HDAC7-222ENST00000477937 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
HDAC7-222ENST00000477937 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
HDAC7-222ENST00000477937 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
HDAC7-222ENST00000477937 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
HDAC7-222ENST00000477937 NPSP0C0P6 89 aa8.62□□□□□ -1.03
HDAC7-222ENST00000477937 KIAA1644Q3SXP7 199 aa8.62□□□□□ -1.03
HDAC7-222ENST00000477937 VCX2Q9H322 139 aa8.62□□□□□ -1.03
HDAC7-222ENST00000477937 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
HDAC7-222ENST00000477937 UBE2D1P51668 147 aa8.61□□□□□ -1.03
HDAC7-222ENST00000477937 COMMD7Q86VX2 200 aa8.61□□□□□ -1.03
HDAC7-222ENST00000477937 AMELXQ99217 191 aa8.61□□□□□ -1.03
HDAC7-222ENST00000477937 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
HDAC7-222ENST00000477937 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
HDAC7-222ENST00000477937 IGIPA6NJ69 53 aa8.6□□□□□ -1.03
HDAC7-222ENST00000477937 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
HDAC7-222ENST00000477937 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
HDAC7-222ENST00000477937 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
HDAC7-222ENST00000477937 Q6ZRP5 223 aa8.6□□□□□ -1.03
HDAC7-222ENST00000477937 C9orf116Q5BN46 136 aaPredicted RBP8.59□□□□□ -1.03
HDAC7-222ENST00000477937 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
HDAC7-222ENST00000477937 LINC00173Q6ZV60 143 aa8.59□□□□□ -1.03
HDAC7-222ENST00000477937 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
HDAC7-222ENST00000477937 GNB1LQ9BYB4 327 aa8.59□□□□□ -1.03
HDAC7-222ENST00000477937 KIAA0087Q14695 138 aa8.58□□□□□ -1.04
HDAC7-222ENST00000477937 COX19Q49B96 90 aa8.58□□□□□ -1.04
HDAC7-222ENST00000477937 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
HDAC7-222ENST00000477937 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 SEC11AP67812 179 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
HDAC7-222ENST00000477937 FAT3Q8TDW7 4589 aa8.56□□□□□ -1.04
HDAC7-222ENST00000477937 TRBV30A0A0K0K1B3 111 aa8.56□□□□□ -1.04
HDAC7-222ENST00000477937 RHEBQ15382 184 aa8.56□□□□□ -1.04
HDAC7-222ENST00000477937 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
HDAC7-222ENST00000477937 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
HDAC7-222ENST00000477937 LINC01549A6NIU2 74 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 MT-ND6P03923 174 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 PRSS2P07478 247 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 HERVK_113P63121 156 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 C2orf82Q6UX34 121 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 ERASQ7Z444 233 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 PACRGQ96M98 296 aaPredicted RBP8.55□□□□□ -1.04
HDAC7-222ENST00000477937 SCGB3A1Q96QR1 104 aa8.55□□□□□ -1.04
HDAC7-222ENST00000477937 CARHSP1Q9Y2V2 147 aaKnown RBP8.55□□□□□ -1.04
HDAC7-222ENST00000477937 CKS1BP61024 79 aa8.54□□□□□ -1.04
HDAC7-222ENST00000477937 FABP9Q0Z7S8 132 aa8.54□□□□□ -1.04
HDAC7-222ENST00000477937 GAGE2EQ4V326 116 aa8.54□□□□□ -1.04
HDAC7-222ENST00000477937 C6orf226Q5I0X4 101 aa8.54□□□□□ -1.04
HDAC7-222ENST00000477937 PHF5AQ7RTV0 110 aaKnown RBP8.54□□□□□ -1.04
HDAC7-222ENST00000477937 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
HDAC7-222ENST00000477937 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
HDAC7-222ENST00000477937 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
HDAC7-222ENST00000477937 GAGE2DQ9UEU5 116 aa8.54□□□□□ -1.04
HDAC7-222ENST00000477937 LINC01546A6NGU7 62 aa8.53□□□□□ -1.04
HDAC7-222ENST00000477937 SRSF9Q13242 221 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDAC7-222ENST00000477937 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
HDAC7-222ENST00000477937 Q8IZM0 81 aa8.53□□□□□ -1.04
HDAC7-222ENST00000477937 LINC01600Q96MT4 127 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms