RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 COL5A1P20908 1838 aaPredicted RBP1.5□□□□□ -2.17
XRN1-211ENST00000477237 IGKV1D-42A0A075B6H8 117 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 IGKV1D-37A0A075B6S9 117 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 TRAV23DV6A0A075B6W5 121 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 IGKV1OR2-108A0A075B7D4 117 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 TRAV12-3A0A0B4J271 114 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 A0A0J9YY99 117 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 LCE6AA0A183 80 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 C17orf98A8MV24 154 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 PANO1I0J062 215 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 HMGN4O00479 90 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 DNAL4O96015 105 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 IGHV1-46P01743 117 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 TFF1P04155 84 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 LINC00315P59091 139 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 ELOF1P60002 83 aaKnown RBP1.5□□□□□ -2.17
XRN1-211ENST00000477237 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.5□□□□□ -2.17
XRN1-211ENST00000477237 ZNF833PQ6ZTB9 187 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 CAMK2N1Q7Z7J9 78 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 TMEM105Q8N8V8 129 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 C20orf166-AS1Q96NR2 134 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 Q9BRP9 147 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 C14orf132Q9NPU4 83 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 LINC00846Q9NV44 126 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 LHFPL6Q9Y693 200 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 ICOSQ9Y6W8 199 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 U3KQK5 164 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 SVILO95425 2214 aa1.5□□□□□ -2.17
XRN1-211ENST00000477237 TNRC6CQ9HCJ0 1690 aaKnown RBP1.49□□□□□ -2.17
XRN1-211ENST00000477237 TRAV12-1A0A0B4J245 112 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 TRBV6-5A0A0K0K1A5 114 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 IGIPA6NJ69 53 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 A8MUU9 505 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 D6R8Y8 96 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 SPINK4O60575 86 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 MIR22HGQ0VDD5 57 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 LINC00483Q53H64 154 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 KRTAP26-1Q6PEX3 210 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 Q6ZS52 159 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 MUSTN1Q8IVN3 82 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 Q8NAQ8 132 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 Q8TAT8 98 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 PRR15LQ9BU68 103 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 FAM215AQ9Y5M1 114 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 TET1Q8NFU7 2136 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 ARHGAP32A7KAX9 2087 aa1.49□□□□□ -2.17
XRN1-211ENST00000477237 MYO7BQ6PIF6 2116 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 IGLV11-55A0A075B6I3 123 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 IGLV10-54A0A075B6I4 117 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 IGKV3D-11A0A0A0MRZ8 115 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 TRBV6-6A0A0A6YYG2 114 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 IGHV1-3A0A0C4DH29 117 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 A0A0J9YX75 114 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 HIGD1CA8MV81 97 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 ODF3BA8MYP8 253 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 P0C879 139 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 FXYD3Q14802 87 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 NREPQ16612 68 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 KPRPQ5T749 579 aaPredicted RBP1.48□□□□□ -2.17
XRN1-211ENST00000477237 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 RPS27LQ71UM5 84 aaKnown RBP1.48□□□□□ -2.17
XRN1-211ENST00000477237 ZCCHC13Q8WW36 166 aaKnown RBP1.48□□□□□ -2.17
XRN1-211ENST00000477237 WFDC6Q9BQY6 131 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 LENEPQ9Y5L5 61 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 SPTBP11277 2137 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 PI4KAP42356 2102 aa1.48□□□□□ -2.17
XRN1-211ENST00000477237 MALRD1Q5VYJ5 2156 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 INTS1Q8N201 2190 aaKnown RBP1.47□□□□□ -2.17
XRN1-211ENST00000477237 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.47□□□□□ -2.17
XRN1-211ENST00000477237 TRAV10A0A0B4J240 114 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 F8VRH5 84 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 H7C2G1 150 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 CTSGP08311 255 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 CNBPP62633 177 aaKnown RBP1.47□□□□□ -2.17
XRN1-211ENST00000477237 DEFB113Q30KQ7 82 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 FDCSPQ8NFU4 85 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 AMELXQ99217 191 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 TTTY12Q9BZ98 90 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 LINC01558Q9Y6Z2 57 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
XRN1-211ENST00000477237 IGLV2-18A0A075B6J9 118 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 TRAV40A0A0B4J280 105 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 IGHV1-18A0A0C4DH31 117 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 TRBV10-1A0A0K0K1A3 114 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 A0A1B0GUT8 65 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 I3L3M4 83 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 IGKV1-17P01599 117 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 RPL38P63173 70 aaKnown RBP1.46□□□□□ -2.18
XRN1-211ENST00000477237 ENHOQ6UWT2 76 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 Q86TA4 180 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 MIR7-3HGQ8N6C7 128 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 UBALD1Q8TB05 177 aa1.46□□□□□ -2.18
XRN1-211ENST00000477237 FBN1P35555 2871 aaKnown RBP1.45□□□□□ -2.18
XRN1-211ENST00000477237 NUP214P35658 2090 aaPredicted RBP1.45□□□□□ -2.18
XRN1-211ENST00000477237 TRAV21A0A0B4J279 112 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 H3BPC8 53 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 H3BQ85 93 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 ZNF861PO60384 105 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms