RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PLEKHB2Q96CS7 222 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 ZNF479Q96JC4 524 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 C20orf78Q9BR46 151 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 SPXQ9BT56 116 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 XCL2Q9UBD3 114 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 DYNC1H1Q14204 4646 aaKnown RBP2.97□□□□□ -1.93
VPS13D-206ENST00000476045 TRBV7-3A0A075B6L6 115 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 A0A0J9YX75 114 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 ZNF815PA8K554 130 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 DEFB4AO15263 64 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 LINC00315P59091 139 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
VPS13D-206ENST00000476045 COTL1Q14019 142 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 ZNF56Q15929 161 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 TAL2Q16559 108 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 FAM159AQ6UWV7 190 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 PRADC1Q9BSG0 188 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 CELA1Q9UNI1 258 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 CYSLTR1Q9Y271 337 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 KIF25-AS1Q9Y6Z4 181 aa2.97□□□□□ -1.93
VPS13D-206ENST00000476045 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV1OR15-1A0A075B7D0 117 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3-16A0A0C4DH30 117 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 C11orf86A6NJI1 115 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 KLLNB2CW77 178 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 E9PLD3 99 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 NXPH4O95158 308 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 PPP1R17O96001 155 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 TSHBP01222 138 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 SEC61BP60468 96 aaKnown RBP2.96□□□□□ -1.94
VPS13D-206ENST00000476045 HERVK_113P61574 105 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 DAD1P61803 113 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
VPS13D-206ENST00000476045 WFDC2Q14508 124 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 SPINK13Q1W4C9 94 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 TTC32Q5I0X7 151 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 FAM74A4Q5TZK3 123 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 FAM222AQ5U5X8 452 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 SFTA2Q6UW10 78 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 AMTNQ6UX39 209 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 ZFP2Q6ZN57 461 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 Q75L30 129 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 MTURNQ8N3F0 131 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 C16orf74Q96GX8 76 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 ODF3Q96PU9 254 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 MDFICQ9P1T7 246 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 PKD1P98161 4303 aa2.96□□□□□ -1.94
VPS13D-206ENST00000476045 IGLV4-69A0A075B6H9 119 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3-73A0A0B4J1V6 119 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 TRBV7-9A0A0J9YWB2 115 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 SDHAF1A6NFY7 115 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 LINC01549A6NIU2 74 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 APOMO95445 188 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 CRYGDP07320 174 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 HTN1P15515 57 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 MT3P25713 68 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 POLR2KP53803 58 aaKnown RBP2.95□□□□□ -1.94
VPS13D-206ENST00000476045 TSPEAR-AS2P59090 65 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 SRSF9Q13242 221 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS13D-206ENST00000476045 PMVKQ15126 192 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
VPS13D-206ENST00000476045 SCGB1D4Q6XE38 83 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 SH2D6Q7Z4S9 175 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 TMEM263Q8WUH6 116 aaKnown RBP2.95□□□□□ -1.94
VPS13D-206ENST00000476045 TMEM141Q96I45 108 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 C9orf85Q96MD7 179 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 KIR2DL4Q99706 377 aa2.95□□□□□ -1.94
VPS13D-206ENST00000476045 OPRPNQ99935 248 aaPredicted RBP2.95□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3-64A0A075B6Q5 118 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 IGHV3OR16-12A0A075B7B8 117 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 LOC107984156A0A0G2JMH3 177 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 IGIPA6NJ69 53 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 H3BMG7 143 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 TSPAN13O95857 204 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 PRM2P04554 102 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 ATP5G1P05496 136 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 LGALS3P17931 250 aaKnown RBP2.94□□□□□ -1.94
VPS13D-206ENST00000476045 PSMB2P49721 201 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 RPL32P62910 135 aaKnown RBP2.94□□□□□ -1.94
VPS13D-206ENST00000476045 PAPPA-AS1Q5QFB9 102 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 Q6ZR54 194 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 ARL17AQ8IVW1 177 aa2.94□□□□□ -1.94
VPS13D-206ENST00000476045 SPANXB1Q9NS25 103 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-206ENST00000476045 MRPL16Q9NX20 251 aaKnown RBP2.94□□□□□ -1.94
VPS13D-206ENST00000476045 HSPG2P98160 4391 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 A0A0J9YXV3 536 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 A0A0J9YY99 117 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 A0A1B0GWB2 263 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 H3BNG1 76 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 M0QY20 66 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 LEPROTO15243 131 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 ZNF22P17026 224 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-206ENST00000476045 CCL18P55774 89 aa2.93□□□□□ -1.94
VPS13D-206ENST00000476045 RHOHQ15669 191 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms