RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 RPL7P18124 248 aaKnown RBP4.87□□□□□ -1.63
LSAMP-204ENST00000475403 LYZP61626 148 aa4.87□□□□□ -1.63
LSAMP-204ENST00000475403 HIST1H4AP62805 103 aaKnown RBP4.87□□□□□ -1.63
LSAMP-204ENST00000475403 PMVKQ15126 192 aa4.87□□□□□ -1.63
LSAMP-204ENST00000475403 STHQ8IWL8 128 aa4.87□□□□□ -1.63
LSAMP-204ENST00000475403 PLEKHB2Q96CS7 222 aa4.87□□□□□ -1.63
LSAMP-204ENST00000475403 C8orf49Q96NF6 230 aa4.87□□□□□ -1.63
LSAMP-204ENST00000475403 FAM236AA0A1B0GUQ0 79 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 FAM236BA0A1B0GV22 79 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 RBAKDNA6NC62 111 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 SDHAF1A6NFY7 115 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 E7EUB6 86 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 F8WDY8 70 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 RBMY1CP0DJD4 496 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 RPL27AP46776 148 aaKnown RBP4.86□□□□□ -1.63
LSAMP-204ENST00000475403 MFAP4P55083 255 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 SCGB3A1Q96QR1 104 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 CHCHD5Q9BSY4 110 aa4.86□□□□□ -1.63
LSAMP-204ENST00000475403 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 F5H768 121 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 EMP1P54849 157 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 C2orf82Q6UX34 121 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 C5orf38Q86SI9 138 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 C6orf223Q8N319 242 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 TMEM141Q96I45 108 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 METTL26Q96S19 204 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 AGPAT4-IT1Q9H0P7 198 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 CELA1Q9UNI1 258 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
LSAMP-204ENST00000475403 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 TEX22C9J3V5 150 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 NDUFC2-KCTD14E9PQ53 114 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 F8W735 103 aaPredicted RBP4.84□□□□□ -1.63
LSAMP-204ENST00000475403 H3BTX0 84 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 I3L2K1 104 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 NDUFA4O00483 81 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 ORM1P02763 201 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 COX6CP09669 75 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 Q5VSD8 79 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 GAGE2AQ6NT46 116 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 RNF125Q96EQ8 232 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 C2orf48Q96LS8 159 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 FANCD2OSQ96PS1 177 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 AMELXQ99217 191 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 TIMM17AQ99595 171 aa4.84□□□□□ -1.63
LSAMP-204ENST00000475403 IGLV4-69A0A075B6H9 119 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 IGLV11-55A0A075B6I3 123 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 TRGV11A0A075B6L2 103 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 LST1O00453 97 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 LEPROTO15243 131 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 IGKV1-17P01599 117 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 HTN3P15516 51 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 DEFB131AP59861 70 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
LSAMP-204ENST00000475403 RPL11P62913 178 aaKnown RBP4.83□□□□□ -1.64
LSAMP-204ENST00000475403 ZNF56Q15929 161 aa4.83□□□□□ -1.64
LSAMP-204ENST00000475403 TRPT1Q86TN4 253 aaKnown RBP4.83□□□□□ -1.64
LSAMP-204ENST00000475403 MRPL53Q96EL3 112 aaKnown RBP4.83□□□□□ -1.64
LSAMP-204ENST00000475403 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV3-49A0A0A0MS15 119 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 H7C423 109 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 M0R3E3 92 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 GAS8-AS1O95177 125 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 TRACP01848 142 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
LSAMP-204ENST00000475403 ZNF80P51504 273 aaPredicted RBP4.82□□□□□ -1.64
LSAMP-204ENST00000475403 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 DAND5Q8N907 189 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 RHPN1-AS1Q9BWJ2 59 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 MSRB1Q9NZV6 116 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 X6R8D5 127 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 NACAE9PAV3 2078 aa4.82□□□□□ -1.64
LSAMP-204ENST00000475403 FLG2Q5D862 2391 aaPredicted RBP4.81□□□□□ -1.64
LSAMP-204ENST00000475403 NBDYA0A0U1RRE5 68 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 TMEM223A0PJW6 202 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 J3QQQ9 107 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 K7EMT4 169 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 GATA1P15976 413 aaPredicted RBP4.81□□□□□ -1.64
LSAMP-204ENST00000475403 MALP21145 153 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 FAM222AQ5U5X8 452 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 C17orf77Q96MU5 243 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 LENEPQ9Y5L5 61 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 ICOSQ9Y6W8 199 aa4.81□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 IGKV2-40A0A087WW87 121 aaPredicted RBP4.8□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV3-21A0A0B4J1V1 117 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV3-74A0A0B4J1X5 117 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 K7EIM0 57 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 TRIAP1O43715 76 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 EIF4EBP3O60516 100 aaPredicted RBP4.8□□□□□ -1.64
LSAMP-204ENST00000475403 IGKV2D-40P01614 121 aaPredicted RBP4.8□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV3-48P01763 117 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 Q1RN00 199 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 ZNF876PQ49A33 203 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 DPH3Q96FX2 82 aa4.8□□□□□ -1.64
LSAMP-204ENST00000475403 DPH3P1Q9H4G8 78 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms