RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.72□□□□□ -1.01
CCDC78-209ENST00000474647 IGKV2-29A2NJV5 120 aaPredicted RBP8.72□□□□□ -1.01
CCDC78-209ENST00000474647 AKR1D1P51857 326 aa8.72□□□□□ -1.01
CCDC78-209ENST00000474647 POLR2KP53803 58 aaKnown RBP8.72□□□□□ -1.01
CCDC78-209ENST00000474647 NDUFA6P56556 154 aa8.72□□□□□ -1.01
CCDC78-209ENST00000474647 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
CCDC78-209ENST00000474647 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
CCDC78-209ENST00000474647 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BKO60814 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BJP06899 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BOP23527 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BBP33778 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BDP58876 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BCP62807 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST2H2BEQ16778 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.02
CCDC78-209ENST00000474647 LINC00518Q8N0U6 118 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 MAP1LC3AQ9H492 121 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
CCDC78-209ENST00000474647 I3L3M4 83 aa8.7□□□□□ -1.02
CCDC78-209ENST00000474647 XCL1P47992 114 aa8.7□□□□□ -1.02
CCDC78-209ENST00000474647 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
CCDC78-209ENST00000474647 FOXI1Q12951 378 aa8.7□□□□□ -1.02
CCDC78-209ENST00000474647 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
CCDC78-209ENST00000474647 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
CCDC78-209ENST00000474647 VCYO14598 125 aa8.69□□□□□ -1.02
CCDC78-209ENST00000474647 FGF6P10767 208 aa8.69□□□□□ -1.02
CCDC78-209ENST00000474647 Q6ZRP5 223 aa8.69□□□□□ -1.02
CCDC78-209ENST00000474647 TSHBP01222 138 aa8.68□□□□□ -1.02
CCDC78-209ENST00000474647 PMCHP20382 165 aa8.68□□□□□ -1.02
CCDC78-209ENST00000474647 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
CCDC78-209ENST00000474647 LPAP08519 4548 aa8.68□□□□□ -1.02
CCDC78-209ENST00000474647 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 TCAPO15273 167 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 CCL25O15444 150 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 Q8N8P6 123 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 OR5A1Q8NGJ0 315 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 C18orf32Q8TCD1 76 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
CCDC78-209ENST00000474647 LOC389332A0A1B0GUA5 103 aa8.66□□□□□ -1.02
CCDC78-209ENST00000474647 IFITM10A6NMD0 228 aa8.66□□□□□ -1.02
CCDC78-209ENST00000474647 H7C423 109 aa8.66□□□□□ -1.02
CCDC78-209ENST00000474647 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
CCDC78-209ENST00000474647 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
CCDC78-209ENST00000474647 NXT2Q9NPJ8 142 aaKnown RBP8.66□□□□□ -1.02
CCDC78-209ENST00000474647 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.02
CCDC78-209ENST00000474647 FCER1GP30273 86 aa8.65□□□□□ -1.02
CCDC78-209ENST00000474647 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.02
CCDC78-209ENST00000474647 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
CCDC78-209ENST00000474647 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC78-209ENST00000474647 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
CCDC78-209ENST00000474647 K7EMI3 77 aa8.64□□□□□ -1.03
CCDC78-209ENST00000474647 ESDP10768 282 aa8.64□□□□□ -1.03
CCDC78-209ENST00000474647 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
CCDC78-209ENST00000474647 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
CCDC78-209ENST00000474647 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
CCDC78-209ENST00000474647 SS18Q15532 418 aa8.63□□□□□ -1.03
CCDC78-209ENST00000474647 C12orf57Q99622 126 aa8.63□□□□□ -1.03
CCDC78-209ENST00000474647 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
CCDC78-209ENST00000474647 ORMDL2Q53FV1 153 aa8.62□□□□□ -1.03
CCDC78-209ENST00000474647 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
CCDC78-209ENST00000474647 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
CCDC78-209ENST00000474647 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
CCDC78-209ENST00000474647 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
CCDC78-209ENST00000474647 LINC00614P0C842 121 aa8.6□□□□□ -1.03
CCDC78-209ENST00000474647 SMIM6P0DI80 62 aa8.6□□□□□ -1.03
CCDC78-209ENST00000474647 MALP21145 153 aa8.6□□□□□ -1.03
CCDC78-209ENST00000474647 PDZD11Q5EBL8 140 aa8.6□□□□□ -1.03
CCDC78-209ENST00000474647 CD164L2Q6UWJ8 174 aa8.6□□□□□ -1.03
CCDC78-209ENST00000474647 S100A2P29034 98 aa8.59□□□□□ -1.03
CCDC78-209ENST00000474647 RPL18AQ02543 176 aaKnown RBP8.59□□□□□ -1.03
CCDC78-209ENST00000474647 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
CCDC78-209ENST00000474647 TMEM18Q96B42 140 aa8.59□□□□□ -1.03
CCDC78-209ENST00000474647 CHCHD1Q96BP2 118 aaKnown RBP8.59□□□□□ -1.03
CCDC78-209ENST00000474647 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
CCDC78-209ENST00000474647 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
CCDC78-209ENST00000474647 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 LINC00310P59036 64 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
CCDC78-209ENST00000474647 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 ZNF664Q8N3J9 261 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 OR10D4PQ8NGN7 298 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 CDC42SE2Q9NRR3 84 aa8.58□□□□□ -1.04
CCDC78-209ENST00000474647 COX7A2LO14548 114 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 FABP4P15090 132 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
CCDC78-209ENST00000474647 C2orf66Q6UXQ4 117 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 UBE2D4Q9Y2X8 147 aa8.57□□□□□ -1.04
CCDC78-209ENST00000474647 A0A096LNJ9 63 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 PCP4L1A6NKN8 68 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 SERF1AO75920 110 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms