RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 Q6ZRU5 148 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
COL1A1-203ENST00000471344 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 COX7A2LO14548 114 aa9.6□□□□□ -0.87
COL1A1-203ENST00000471344 PRR3P79522 188 aaKnown RBP9.6□□□□□ -0.87
COL1A1-203ENST00000471344 PRELID3AQ96N28 172 aa9.6□□□□□ -0.87
COL1A1-203ENST00000471344 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
COL1A1-203ENST00000471344 MALP21145 153 aa9.59□□□□□ -0.87
COL1A1-203ENST00000471344 RHEBQ15382 184 aa9.59□□□□□ -0.87
COL1A1-203ENST00000471344 KIAA1644Q3SXP7 199 aa9.59□□□□□ -0.87
COL1A1-203ENST00000471344 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
COL1A1-203ENST00000471344 LINC00474Q9P2X8 69 aa9.58□□□□□ -0.88
COL1A1-203ENST00000471344 TGIF2-C20orf24A0A0A6YYL0 155 aa9.57□□□□□ -0.88
COL1A1-203ENST00000471344 GAGE2BQ13066 116 aa9.57□□□□□ -0.88
COL1A1-203ENST00000471344 TRAV9-1A0A075B6T8 112 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 A0A0J9YXV3 536 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 ODF1Q14990 250 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 SPANXA1Q9NS26 97 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
COL1A1-203ENST00000471344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.55□□□□□ -0.88
COL1A1-203ENST00000471344 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
COL1A1-203ENST00000471344 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
COL1A1-203ENST00000471344 A0A1W2PNN7 141 aa9.54□□□□□ -0.88
COL1A1-203ENST00000471344 S100PP25815 95 aa9.54□□□□□ -0.88
COL1A1-203ENST00000471344 MRPS36P82909 103 aaKnown RBP9.54□□□□□ -0.88
COL1A1-203ENST00000471344 SVBPQ8N300 66 aa9.54□□□□□ -0.88
COL1A1-203ENST00000471344 YPEL4Q96NS1 127 aa9.54□□□□□ -0.88
COL1A1-203ENST00000471344 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
COL1A1-203ENST00000471344 SNAPINO95295 136 aa9.53□□□□□ -0.88
COL1A1-203ENST00000471344 APOMO95445 188 aa9.53□□□□□ -0.88
COL1A1-203ENST00000471344 LAMTOR2Q9Y2Q5 125 aa9.53□□□□□ -0.88
COL1A1-203ENST00000471344 IGHV3OR16-9A0A0B4J2B5 98 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 IFITM10A6NMD0 228 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 RAB5AP20339 215 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
COL1A1-203ENST00000471344 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 C2orf48Q96LS8 159 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 GNB1LQ9BYB4 327 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
COL1A1-203ENST00000471344 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
COL1A1-203ENST00000471344 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
COL1A1-203ENST00000471344 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
COL1A1-203ENST00000471344 Q8N8P6 123 aa9.51□□□□□ -0.89
COL1A1-203ENST00000471344 MRPL18Q9H0U6 180 aaKnown RBP9.51□□□□□ -0.89
COL1A1-203ENST00000471344 IGLV4-3A0A075B6K6 122 aa9.5□□□□□ -0.89
COL1A1-203ENST00000471344 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
COL1A1-203ENST00000471344 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
COL1A1-203ENST00000471344 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
COL1A1-203ENST00000471344 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
COL1A1-203ENST00000471344 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
COL1A1-203ENST00000471344 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
COL1A1-203ENST00000471344 F8WDY8 70 aa9.48□□□□□ -0.89
COL1A1-203ENST00000471344 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
COL1A1-203ENST00000471344 UNQ6190/PRO20217Q6UXQ8 127 aa9.48□□□□□ -0.89
COL1A1-203ENST00000471344 Q6ZRP5 223 aa9.48□□□□□ -0.89
COL1A1-203ENST00000471344 LINC01600Q96MT4 127 aa9.48□□□□□ -0.89
COL1A1-203ENST00000471344 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
COL1A1-203ENST00000471344 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL1A1-203ENST00000471344 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
COL1A1-203ENST00000471344 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
COL1A1-203ENST00000471344 FAM168BA1KXE4 195 aa9.46□□□□□ -0.9
COL1A1-203ENST00000471344 SPINK6Q6UWN8 80 aa9.46□□□□□ -0.9
COL1A1-203ENST00000471344 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.9
COL1A1-203ENST00000471344 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.9
COL1A1-203ENST00000471344 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.9
COL1A1-203ENST00000471344 K7EMI3 77 aa9.45□□□□□ -0.9
COL1A1-203ENST00000471344 MT-ND6P03923 174 aa9.45□□□□□ -0.9
COL1A1-203ENST00000471344 LRP2P98164 4655 aa9.45□□□□□ -0.9
COL1A1-203ENST00000471344 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
COL1A1-203ENST00000471344 LINC00173Q6ZV60 143 aa9.45□□□□□ -0.9
COL1A1-203ENST00000471344 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
COL1A1-203ENST00000471344 A0A087WZ39 114 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 NDUFA1O15239 70 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 UBE2D1P51668 147 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 COX19Q49B96 90 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
COL1A1-203ENST00000471344 CYSLTR1Q9Y271 337 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
COL1A1-203ENST00000471344 NPSP0C0P6 89 aa9.43□□□□□ -0.9
COL1A1-203ENST00000471344 ORMDL2Q53FV1 153 aa9.43□□□□□ -0.9
COL1A1-203ENST00000471344 C2orf82Q6UX34 121 aa9.43□□□□□ -0.9
COL1A1-203ENST00000471344 KRTAP10-8P60410 259 aa9.42□□□□□ -0.9
COL1A1-203ENST00000471344 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
COL1A1-203ENST00000471344 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
COL1A1-203ENST00000471344 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 GAGE2EQ4V326 116 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 Q6ZN92 141 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
COL1A1-203ENST00000471344 LINC01561Q8N1V8 128 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
COL1A1-203ENST00000471344 GAGE2DQ9UEU5 116 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms