RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 IGLV4-69A0A075B6H9 119 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 C10orf25Q5T742 122 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 Q6ZRU5 148 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 ATP5L2Q7Z4Y8 100 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 STPG4Q8N801 248 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 KIR2DL4Q99706 377 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 SMIM2Q9BVW6 85 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 AP5S1Q9NUS5 200 aa5.75□□□□□ -1.49
SHROOM3-203ENST00000469923 TRAV9-1A0A075B6T8 112 aa5.74□□□□□ -1.49
SHROOM3-203ENST00000469923 ZNF25P17030 456 aaPredicted RBP5.74□□□□□ -1.49
SHROOM3-203ENST00000469923 RAB5AP20339 215 aa5.74□□□□□ -1.49
SHROOM3-203ENST00000469923 KIAA1644Q3SXP7 199 aa5.74□□□□□ -1.49
SHROOM3-203ENST00000469923 CD164L2Q6UWJ8 174 aa5.74□□□□□ -1.49
SHROOM3-203ENST00000469923 ORMDL3Q8N138 153 aa5.74□□□□□ -1.49
SHROOM3-203ENST00000469923 PPBPP02775 128 aa5.73□□□□□ -1.49
SHROOM3-203ENST00000469923 RPL32P62910 135 aaKnown RBP5.73□□□□□ -1.49
SHROOM3-203ENST00000469923 GAGE2BQ13066 116 aa5.73□□□□□ -1.49
SHROOM3-203ENST00000469923 CFAP161Q6P656 301 aa5.73□□□□□ -1.49
SHROOM3-203ENST00000469923 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
SHROOM3-203ENST00000469923 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 PRSS47A8MTI9 375 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 OXTP01178 125 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 SS18Q15532 418 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 CSDC2Q9Y534 153 aaKnown RBP5.72□□□□□ -1.49
SHROOM3-203ENST00000469923 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.71□□□□□ -1.5
SHROOM3-203ENST00000469923 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.71□□□□□ -1.5
SHROOM3-203ENST00000469923 TMEM18Q96B42 140 aa5.71□□□□□ -1.5
SHROOM3-203ENST00000469923 CARD19Q96LW7 228 aa5.71□□□□□ -1.5
SHROOM3-203ENST00000469923 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.5
SHROOM3-203ENST00000469923 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
SHROOM3-203ENST00000469923 COX7A2LO14548 114 aa5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 PRR3P79522 188 aaKnown RBP5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 PHF5AQ7RTV0 110 aaKnown RBP5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 Q8N8P6 123 aa5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 MAP1LC3AQ9H492 121 aa5.7□□□□□ -1.5
SHROOM3-203ENST00000469923 IGHV3OR16-9A0A0B4J2B5 98 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 C1orf196B1AJZ1 125 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 ZNF561-AS1K7EIQ3 104 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 TRGC2P03986 189 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 PTTG1IPP53801 180 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 KIAA0087Q14695 138 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 COX19Q49B96 90 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 C2orf82Q6UX34 121 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 TRAPPC1Q9Y5R8 145 aa5.69□□□□□ -1.5
SHROOM3-203ENST00000469923 IGLV4-3A0A075B6K6 122 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 MT-ND6P03923 174 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 MALP21145 153 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 FABP9Q0Z7S8 132 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 LINC00242Q5T6M2 205 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 LINC00173Q6ZV60 143 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 GNB1LQ9BYB4 327 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 LAMTOR2Q9Y2Q5 125 aa5.68□□□□□ -1.5
SHROOM3-203ENST00000469923 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 RAB5BP61020 215 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 MRPS36P82909 103 aaKnown RBP5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 SPAG11BQ08648 103 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 SMAGPQ0VAQ4 97 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 C2orf66Q6UXQ4 117 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 CAMK2N2Q96S95 79 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 ALKBH7Q9BT30 221 aaPredicted RBP5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 SPANXA1Q9NS26 97 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
SHROOM3-203ENST00000469923 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
SHROOM3-203ENST00000469923 Q6ZRP5 223 aa5.66□□□□□ -1.5
SHROOM3-203ENST00000469923 ORAOV1Q8WV07 137 aa5.66□□□□□ -1.5
SHROOM3-203ENST00000469923 PYGO1Q9Y3Y4 419 aa5.66□□□□□ -1.5
SHROOM3-203ENST00000469923 LOC107984640A0A0U1RRK4 108 aa5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 GAGE2EQ4V326 116 aa5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 NXT2Q9NPJ8 142 aaKnown RBP5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 GAGE2DQ9UEU5 116 aa5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 PLA2G2DQ9UNK4 145 aa5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 CYSLTR1Q9Y271 337 aa5.65□□□□□ -1.5
SHROOM3-203ENST00000469923 IGIPA6NJ69 53 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BKO60814 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 APOMO95445 188 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BJP06899 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BOP23527 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BBP33778 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 UBE2D1P51668 147 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BDP58876 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BCP62807 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST2H2BEQ16778 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 ORMDL2Q53FV1 153 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 C7orf33Q8WU49 177 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BHQ93079 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 TMEM141Q96I45 108 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 C2orf48Q96LS8 159 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 LINC01600Q96MT4 127 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 AMELXQ99217 191 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms