RNA–Protein interactions for RNA: ENST00000464981.1

PCDH19-204, Transcript of protocadherin 19, humanhuman

TSL 3

Gene PCDH19, Length 329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-204ENST00000464981 MUC17Q685J3 4493 aa-0.93□□□□□ -2.56
PCDH19-204ENST00000464981 IGLC7A0M8Q6 106 aa-0.93□□□□□ -2.56
PCDH19-204ENST00000464981 TPPP2P59282 170 aa-0.93□□□□□ -2.56
PCDH19-204ENST00000464981 COPS9Q8WXC6 57 aa-0.93□□□□□ -2.56
PCDH19-204ENST00000464981 TSLPQ969D9 159 aa-0.93□□□□□ -2.56
PCDH19-204ENST00000464981 DNAH3Q8TD57 4116 aa-0.93□□□□□ -2.56
PCDH19-204ENST00000464981 COL6A5A8TX70 2615 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 SPINK4O60575 86 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 ARPC4P59998 168 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 DEFB123Q8N688 67 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 MGST2Q99735 147 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 DYNLRB1Q9NP97 96 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 LINC01558Q9Y6Z2 57 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 PKHD1L1Q86WI1 4243 aa-0.94□□□□□ -2.56
PCDH19-204ENST00000464981 MYOM3Q5VTT5 1437 aa-0.95□□□□□ -2.56
PCDH19-204ENST00000464981 MTORP42345 2549 aa-0.95□□□□□ -2.56
PCDH19-204ENST00000464981 PFDN5Q99471 154 aa-0.95□□□□□ -2.56
PCDH19-204ENST00000464981 SERP1Q9Y6X1 66 aa-0.95□□□□□ -2.56
PCDH19-204ENST00000464981 SPEF2Q9C093 1822 aa-0.95□□□□□ -2.56
PCDH19-204ENST00000464981 ITPR1Q14643 2758 aa-0.95□□□□□ -2.56
PCDH19-204ENST00000464981 NBASA2RRP1 2371 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 DNHD1Q96M86 4753 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 TRBV7-3A0A075B6L6 115 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 M0R2T5 61 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 HMGN4O00479 90 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 DNAJC13O75165 2243 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 LRRK2Q5S007 2527 aa-0.96□□□□□ -2.56
PCDH19-204ENST00000464981 DOCK1Q14185 1865 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 POLA1P09884 1462 aaPredicted RBP-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 CFTRP13569 1480 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 GRIN2AQ12879 1464 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 CEP152O94986 1710 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 NBEAL2Q6ZNJ1 2754 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 RERGLQ9H628 205 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 ACACAQ13085 2346 aa-0.97□□□□□ -2.56
PCDH19-204ENST00000464981 VPS13DQ5THJ4 4388 aa-0.97□□□□□ -2.57
PCDH19-204ENST00000464981 KIF21AQ7Z4S6 1674 aa-0.97□□□□□ -2.57
PCDH19-204ENST00000464981 SHANK2Q9UPX8 1470 aa-0.98□□□□□ -2.57
PCDH19-204ENST00000464981 AKAP9Q99996 3911 aa-0.98□□□□□ -2.57
PCDH19-204ENST00000464981 CCDC168Q8NDH2 2452 aa-0.98□□□□□ -2.57
PCDH19-204ENST00000464981 SFT2D2O95562 160 aa-0.98□□□□□ -2.57
PCDH19-204ENST00000464981 DEFB105AQ8NG35 78 aa-0.98□□□□□ -2.57
PCDH19-204ENST00000464981 ABCA13Q86UQ4 5058 aa-0.98□□□□□ -2.57
PCDH19-204ENST00000464981 BICRAQ9NZM4 1560 aa-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 DNAH2Q9P225 4427 aa-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 FAT3Q8TDW7 4589 aa-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 LOC105371267A0A1B0GV96 52 aa-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 MEIG1Q5JSS6 88 aa-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 SNRNP25Q9BV90 132 aaKnown RBP-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 GCN1Q92616 2671 aaKnown RBP-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 GAPVD1Q14C86 1478 aa-0.99□□□□□ -2.57
PCDH19-204ENST00000464981 SBF2Q86WG5 1849 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 PATJQ8NI35 1801 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 FAM25AB3EWG3 89 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 FAM25CB3EWG5 89 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 FAM25GB3EWG6 89 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 MRPL54Q6P161 138 aaKnown RBP-1□□□□□ -2.57
PCDH19-204ENST00000464981 PPP3R2Q96LZ3 170 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 CEP295Q9C0D2 2601 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 PLECQ15149 4684 aaKnown RBP-1□□□□□ -2.57
PCDH19-204ENST00000464981 LAMA3Q16787 3333 aa-1□□□□□ -2.57
PCDH19-204ENST00000464981 KDM5AP29375 1690 aaKnown RBP-1□□□□□ -2.57
PCDH19-204ENST00000464981 RIMS1Q86UR5 1692 aaKnown RBP-1□□□□□ -2.57
PCDH19-204ENST00000464981 CUBNO60494 3623 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 KALRNO60229 2985 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 LOC285095A0A1B0GVY8 99 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 MIF4GDA9UHW6 222 aaKnown RBP-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 NAA60Q9H7X0 242 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 UTP20O75691 2785 aaKnown RBP-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 NSD3Q9BZ95 1437 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 IQSEC2Q5JU85 1478 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 ARHGEF12Q9NZN5 1544 aa-1.01□□□□□ -2.57
PCDH19-204ENST00000464981 TRBV7-4A0A0J9YYF1 115 aa-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 MGPP08493 103 aa-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 C10orf113Q5VZT2 155 aa-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 PKD1L2Q7Z442 2459 aa-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 TMEM263Q8WUH6 116 aaKnown RBP-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 ARL11Q969Q4 196 aa-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 SPANXDQ9BXN6 97 aa-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 PAIP2BQ9ULR5 123 aaKnown RBP-1.02□□□□□ -2.57
PCDH19-204ENST00000464981 DOCK2Q92608 1830 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 CPSF1Q10570 1443 aaKnown RBP-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 CHKB-CPT1BH3BT56 60 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 GNG7O60262 68 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 UBA52P62987 128 aaKnown RBP-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 FDCSPQ8NFU4 85 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 FAIMQ9NVQ4 179 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 NBEAQ8NFP9 2946 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 ZFHX3Q15911 3703 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 ITPR2Q14571 2701 aa-1.03□□□□□ -2.57
PCDH19-204ENST00000464981 PKD1P98161 4303 aa-1.03□□□□□ -2.58
PCDH19-204ENST00000464981 A0A0C4DFX4 3053 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 LINC00959A0A1B0GUT2 108 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 SYS1-DBNDD2H3BUS1 97 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 IGLC1P0CG04 106 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 SELENOWP63302 87 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 CATR1Q13166 79 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 Q56UQ5 140 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 SPRR2FQ96RM1 72 aa-1.04□□□□□ -2.58
PCDH19-204ENST00000464981 LINC00470Q9BZP3 86 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms